Gene PHATR_28222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_28222 
Symbol 
ID7204542 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp457005 
End bp458167 
Gene Length1163 bp 
Protein Length316 aa 
Translation table 
GC content45% 
IMG OID 
Producttransaldolase 
Protein accessionXP_002185708 
Protein GI219120953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.562417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGCAATAGGA CATAACACAA CCAGTTTCAT ATTCGACAAC ATTACTAATC ACACGAACAA 
ACAACCGAAG CACCATGTCG AATCAGTACG AGCAATTGAA AGAGTTTACG ATCTGCGTTG
CGGATTCAGG CGATGTCGAT GCGATCAAAG AGCTGAAGCC CCAAGATGCG ACAACAAATC
CTTCCCTCAT CTACAAAGCG GCTCAGATGG ATCAATACGC CAAGCTGGTA GATGATGCTA
TCAAGTACGG AAACGGAAAC CTAGAAATCG TCATGGTAGG TAATAGCGTT TGGTTTTGTC
GAAGCATAGC CCTATTGTGG AAACCTTCTC ACAATGAAAT TCTTTTTTGT TTTTTAAGGA
TAAACTGGCC GTTAACTTTG GGACAGAAAT CACCAAGATC GTGCCAGGAT ATGTCTCCAC
GGAAGTTGAT GCGCGCCTTT CCTTCGATAC TGAGGCAACT ATCGAAAAGG CCCGTAGCAT
CATTCAGCTG TACAAGGAAG TCGGTGTTGA CAAATCTCGA ATCCTAATTA AAGTCGCTGC
TACTTGGGAA GGAATCAAAG CGGCCGAAGT TTTGGAGAAG GAAGGAATCA CTTGCAACTT
AACCTTGATC TTTAGCATTG CGCAGGCTAT TGCCTGTGCC GAAGCGGGCT GCACCTTGAT
CAGTCCTTTT GTTGGGCGAA TCATGGATTG GTACAAGAAG GATCAAGGAG TTGATGGGTT
TGAGCCAAAA GAGGACCCAG GTGTTATTTC TGTGACAAAA ATTTACAACT ACTACAAGAA
GTACGGATTT AATACTATCG TAATGGGTGC ATCCTTCCGT AATGCCGGGC AAATTACTGA
GCTTGCAGGA TGCGACCGTT TGACGATTTC ACCTCCTCTT CTGAATGAGC TGATCGCGTC
AGCGGACAAG TTGGAAAAGA AACTTGATGC TAGCAACGCC GCTACCTTGG ATATTGCCAA
AGTCGATATG GATGAGAAAA CTTTCCGTTG GATGATGAAC GAAGATCCCA TGGCGACAGA
GAAGTTGGCA GATGGTATCC GCAACTTCGC TGCCGACGTT GTGAAGCTCG AAGAGATTGT
GAAGAAAAAG ATGTAAGCAA GCTGAGTCGC AGAATGCATC AACAGTTAAA AAGGTAGTAA
TAACCGAAAT TTTCGGCTCT TCC
 
Protein sequence
MSNQYEQLKE FTICVADSGD VDAIKELKPQ DATTNPSLIY KAAQMDQYAK LVDDAIKYGN 
GNLEIVMVGN SDKLAVNFGT EITKIVPGYV STEVDARLSF DTEATIEKAR SIIQLYKEVG
VDKSRILIKV AATWEGIKAA EVLEKEGITC NLTLIFSIAQ AIACAEAGCT LISPFVGRIM
DWYKKDQGVD GFEPKEDPGV ISVTKIYNYY KKYGFNTIVM GASFRNAGQI TELAGCDRLT
ISPPLLNELI ASADKLEKKL DASNAATLDI AKVDMDEKTF RWMMNEDPMA TEKLADGIRN
FAADVVKLEE IVKKKM