Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_28215 |
Symbol | |
ID | 7204658 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 450078 |
End bp | 451671 |
Gene Length | 1594 bp |
Protein Length | 297 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185706 |
Protein GI | 219120949 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | AGCACACAGC ATATCTCCTC CTCTTGATAG AAGCAGGACG CTGTTGTATC TCCTTGTTGC AAACAACTAT TCCGCACATT TAGACATCTA CCCGCACCTT GAAAACAGTC TTATCAGATT TCGCTGCACT TTGTTGATAT CCGGAGACTT TTTCCGCGAG AAAATTTCGA TTCATGTGTT GCTGCTGTCC GCCGGCTATA TCTGCGCTAT TTTGCCTTTG GGCAAAGTCA GGATGCTCGA AAGGAACTGT GGCGGGGGCC TTGACTTTTT TTCCGCCTGA ACCTCCATTA TATCGATTCG AAAGACATGA CGCAGAAGGC CGAGTCTTGC GTGACAATCA AGAAGCTGAC GATATTCGGG CCGTTAACCA AAGTGTCGAC GAGGAAGTTG GAGACTTGCA ACTGCCAGAG TCATCCGAAC CCCTTGACGC CAAGACTGAT GGACAAACAA AGGAGAAGAT GAAGTCACCA ATCGAGCAAC TGACACAGCA GGCCGGCGAA CGAAAGATAC GTGCAAGAGA ACGACAGAAA CGGGATGCCA AAGATGCGGT ACACAACGTG TCGTTCAAAC TCTTGCTAGA TCCGCGGCTA CAAGTCCCGC CGCACGACGA CAGCTTAATT GAAGCTGTCA AGATTCCTTC GGCTAGGGGA GTTTACCTTG CGGCAGTGCT TTACCGAATG TCACCTCCGT CTCGCCCGGC TGACAGGAAA ACAATCATCT ACAGCCATGG GAATGCCACG GATATCGGTG CAATGTTCCC CATCCAAGTA GTTATGGCGC ACAGCCTAGA CTGCAATGTA CTCTCATATG ACTACTCGGG GTACGGAGAA AGTGGAGGTG TACCTGATGA ACACGCCACC TACCGGGACA TGGAAGCCGT TTATGAGTAC GTATTGGAAC ACCTGGCAGG GAATGCCCCA TCCAATGTGA TATTGTATGG TCAGTCTGTC GGGAGTGGAC CGTGCTGCTA CTTAGCAGCC ACAGAAAATG ATTTGGGAGG CATGATTTTG CACAGTCCGT TTACAAGTGG AATGCGAGTA TTGACGCCGA GCCGGTATGT GAATACAGTG CTTTCCAAGT GTTTTTCTCC CAGGAATACA ATTTTTCATT CTGTGAGCAT CGTTTTTGTT TGTAGGTTAT TGTCTTGTCT GGACATATAT CCAAATATTG ATCGCATCAA AAAGGTTTCG TGTCCTGTGA TGGTGATCCA TGGCCGCCTT GATCAAGAAG TAGACGTTTC ACATGGCATG GACATTCACA ATGCCGTACC TGAAGAATGT CGTCGAGATC CATGGTGGGT TTCAGATCGG GGACATAATG ACATCATCGA GGGACCGGGA AAACTGTCCC AGTATGTTCG TCGATTGAGA AGATTCCTGA ACTCCCTGGA CACTTGAAGA GTGTAAATGA CGACGTGTAT ATGATCTCGT CAGTCATTTT GTTCTCTTTT TTGCCTAAGG CTGCGAATAT AGCTTTGAAG CCTACGTTTT GTATTGTGAA CAGGGACTAT TTACTCTTCC ACGGAACAGA TATCTCCTTT GCCTTCTATC TTCGTGTCTT GTAAATTCTT TTACTCGCTT CGCGGTCTTT CCAA
|
Protein sequence | MCCCCPPAIS ALFCLWAKSG CSKGTVAGAL TFFPPEPPLY RFERHDAEGR VLHPRLQVPP HDDSLIEAVK IPSARGVYLA AVLYRMSPPS RPADRKTIIY SHGNATDIGA MFPIQVVMAH SLDCNVLSYD YSGYGESGGV PDEHATYRDM EAVYEYVLEH LAGNAPSNVI LYGQSVGSGP CCYLAATEND LGGMILHSPF TSGMRVLTPS RLLSCLDIYP NIDRIKKVSC PVMVIHGRLD QEVDVSHGMD IHNAVPEECR RDPWWVSDRG HNDIIEGPGK LSQYVRRLRR FLNSLDT
|
| |