Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_28202 |
Symbol | |
ID | 7204650 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | - |
Start bp | 404371 |
End bp | 405270 |
Gene Length | 900 bp |
Protein Length | 245 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | proteasome subunit alpha |
Protein accession | XP_002185881 |
Protein GI | 219121310 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACTTGA CTCGCTCTGA ATACGATCGT GGTGTCAACA CGTTTTCACC AGAAGGACGT CTGTTTCAGG TATGCATGAT TTCTTTGTTG TCATCCTTCT TCCATTGAAC ACGGGTCACT TTTCATCATC TTTACGCTCA GAACATACGT TTGTATATTT TGTTCTGACT AACACTTGCG TTTGTCGTGA TTGTCACTGA TGTGTGAATT TAGGTCGAAT ACGCGATCGA AGCGATCAAG CTTGGCTCCA CTGCAGTCGG ACTCCAAACC AAGGATGGCT GTATCCTAGC CGTAGAAAAG CGTCTCAGCA GTCCACTGCT GGATCCATCC TCGGTGGAAA AGATTGCCGA AGTCGATTCC CACATTGGTG CCGCCATGTC GGGTCTCGTC GCCGACGCCC GGACGCTCGT CGATCACGCC CGTGTTGAAG CACAGAACCA CACCTTTACC TATGACGAAC CGATTGGCGT AGAAGCCTTG ACCCAAGCTG TTTGCGATCT CGCCTTGTCC TTTGGGGAAG GGAGCGATGG GGATTCCAAG AAGCGCATGA GTCGTCCTTT TGGAGTAGCG CTGCTGTTGG CCGGCTACGA CGAACTGGAT GGCTGTCAGC TTTTCTTTAG TGATCCATCT GGAACCTTTG TACGATACAA GGCCAAGGCT ATCGGCGCCG GTTCCGAAGG TGCGCAGTCG AATCTGGAAG AGTCATACTC GGAAACAATG ACTTTAAACG AAGCCGAAGA GCTAGCTTTG AGTACTCTCA AGCAAGTCAT GGAGGAAAAA ATCTCTATCG AAAATATTGA GCTCGCCCGA GTTACCCCGG AGAAGGGTTT TCATATTGCG ACTCCCGAGG AAGTCGCCGT GGCCTTGGAA CGCTTAAAGT AAAAAAAAGT GGGATTGTTG
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Protein sequence | MYLTRSEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAVGL QTKDGCILAV EKRLSSPLLD PSSVEKIAEV DSHIGAAMSG LVADARTLVD HARVEAQNHT FTYDEPIGVE ALTQAVCDLA LSFGEGSDGD SKKRMSRPFG VALLLAGYDE LDGCQLFFSD PSGTFVRYKA KAIGAGSEGA QSNLEESYSE TMTLNEAEEL ALSTLKQVME EKISIENIEL ARVTPEKGFH IATPEEVAVA LERLK
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