Gene PHATR_21198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_21198 
Symbol 
ID7204459 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp835526 
End bp836436 
Gene Length911 bp 
Protein Length205 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185963 
Protein GI219121480 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00268356 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTAAATGGAG GAAAAAACTT TGGGCTGATA CAGATATATT CACATCAAAG ACAATCGAAT 
CGCTATGAAT CGATTATCAG CGCCAACGTC AATTTCCGTT AATATTCTGG ATCGCCCCAT
AGGAGGGAGG GGAAGCCGGT AAGCGATTGG CGAAGATAAA GGAAACCACC TATTGCAAGA
GAACGAACAA TAGCTCACAA TCTGATTCAG TTCTACATCT GAGCAAACTG TCAGCCTCTC
CATGTTTTCT TATCTTTATT CGGAAATTGT CCAGTACCAT CAAAATCGAG TGGACAGTAT
CAGTGAACTT GAACGCAAGC TCGAAGCGAC AGGCTACGGC GTTGGTCTCC GAGTTTTGGA
GCTGTTGACC TTTCGTACCA AGGACTATAC AAGAGAGACA TCGTTGATGA ACATGCTGCA
ATTCGTCTCT ACAACAGCTT GGAAGTCGTT ATTTGGAAAA GCAGCGGATT CATTGGAACG
GAGTATTGAT CACGCGGATG AATATATGAT TGTGGATTAC GCGCCAATTA CAAGGTATGC
ATGTGTAAAC TGTTTTGATC AGAGCGTTTT CGGGCCTCCT AATTCCGAAG TCTCTACTGT
GTTGCAGTAC CTTTGTAAGC GTCCCTGCCG ATTTTGGCGG ACTTTCGGTC GATGCATACA
TATCGGGCAT GATTGGCGGA ATGCTGGACG GCGCAGGATT TCCGGCACGG GTGACCGCTC
ATTCCGTCGC GCTGGAAGAC GGTGAAGCGG CGCCCCTTAG CACTACCACC AGTGCGAGTT
CGGCTGGGAC ACTCTCCGGT AACGCCACAA ACGTGCACAG CTCAGTGGTG CTGCCCCCGC
GGAAGGAAAA GGCAGTCTTT CTAGTAAAAT TTGCGGCATC CGTTTTGGAA CGAGACGCGC
ATCTCAGCTA A
 
Protein sequence
MNRLSAPTSI SVNILDRPIG GRGSRSTSEQ TVSLSMFSYL YSEIVQYHQN RVDSISELER 
KLEATGYGVG LRVLELLTFR TKDYTRETSL MNMLQFVSTT AWKSLFGKAA DSLERSIDHA
DEYMIVDYAP ITSTFVSVPA DFGGLSVDAY ISGMIGGMLD GAGFPARVTA HSVALEDVVL
PPRKEKAVFL VKFAASVLER DAHLS