Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_21198 |
Symbol | |
ID | 7204459 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | - |
Start bp | 835526 |
End bp | 836436 |
Gene Length | 911 bp |
Protein Length | 205 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185963 |
Protein GI | 219121480 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00268356 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTAAATGGAG GAAAAAACTT TGGGCTGATA CAGATATATT CACATCAAAG ACAATCGAAT CGCTATGAAT CGATTATCAG CGCCAACGTC AATTTCCGTT AATATTCTGG ATCGCCCCAT AGGAGGGAGG GGAAGCCGGT AAGCGATTGG CGAAGATAAA GGAAACCACC TATTGCAAGA GAACGAACAA TAGCTCACAA TCTGATTCAG TTCTACATCT GAGCAAACTG TCAGCCTCTC CATGTTTTCT TATCTTTATT CGGAAATTGT CCAGTACCAT CAAAATCGAG TGGACAGTAT CAGTGAACTT GAACGCAAGC TCGAAGCGAC AGGCTACGGC GTTGGTCTCC GAGTTTTGGA GCTGTTGACC TTTCGTACCA AGGACTATAC AAGAGAGACA TCGTTGATGA ACATGCTGCA ATTCGTCTCT ACAACAGCTT GGAAGTCGTT ATTTGGAAAA GCAGCGGATT CATTGGAACG GAGTATTGAT CACGCGGATG AATATATGAT TGTGGATTAC GCGCCAATTA CAAGGTATGC ATGTGTAAAC TGTTTTGATC AGAGCGTTTT CGGGCCTCCT AATTCCGAAG TCTCTACTGT GTTGCAGTAC CTTTGTAAGC GTCCCTGCCG ATTTTGGCGG ACTTTCGGTC GATGCATACA TATCGGGCAT GATTGGCGGA ATGCTGGACG GCGCAGGATT TCCGGCACGG GTGACCGCTC ATTCCGTCGC GCTGGAAGAC GGTGAAGCGG CGCCCCTTAG CACTACCACC AGTGCGAGTT CGGCTGGGAC ACTCTCCGGT AACGCCACAA ACGTGCACAG CTCAGTGGTG CTGCCCCCGC GGAAGGAAAA GGCAGTCTTT CTAGTAAAAT TTGCGGCATC CGTTTTGGAA CGAGACGCGC ATCTCAGCTA A
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Protein sequence | MNRLSAPTSI SVNILDRPIG GRGSRSTSEQ TVSLSMFSYL YSEIVQYHQN RVDSISELER KLEATGYGVG LRVLELLTFR TKDYTRETSL MNMLQFVSTT AWKSLFGKAA DSLERSIDHA DEYMIVDYAP ITSTFVSVPA DFGGLSVDAY ISGMIGGMLD GAGFPARVTA HSVALEDVVL PPRKEKAVFL VKFAASVLER DAHLS
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