Gene PHATR_21147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_21147 
Symbol 
ID7204712 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp637603 
End bp638858 
Gene Length1256 bp 
Protein Length307 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185754 
Protein GI219121045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTGTTTGTG CATCGCATCC GCAGCTCCTA CTGGATCTAT CGTGCCGTGC CCCCATTCCC 
AAGTTACCTT CCCGACTACT CGTCTTCCGA ACGACGAAGT TGTGCACTGG GTAGTCATCA
CGTCATCGAC TTCGTCTCGT ACACGTTTGG AAAGTGTGTC GGTGTTGTGT GGTGATTGAC
AGTGTGATTG TAAAACCAGT GGTATCATGG CCAAGAAAAA GGTGCTCCTC ATGGGCAAGG
CCCATTCCGG AAAGACCTCC ATGCGCAGTA TTATATTTGC CAATTACCTA GCCCGAGACA
CCACGCGTTT GTCGCCGACG TTGGACGTCG AGCACCATCA CGTGCGCTTC CTCGGAGACG
TCATGCTCAA TCTATGGGAT TGCGGAGGGC AGGACGCCTT TTTCGAGTCC TACTTTGAAC
GCGATCGGGA AACCATATTC CGATCCGTCG AACTCCTCAT TTACGTCTTT GACATTGAAT
CGGAATCGCC GGAAAAGGAC TTTGATCACT TCTGTGGAGT CCTAGAAGCG ATTGAAGAAA
ACTCTCCCGA CGCCCGTATC TTTGTCCTCG TGCACAAGAT GGATCTCGTC GCACCGCAGG
ATCGCGCGCA CGTTCTCCGC GAACGCGAAA GCCTCGTGGC CGAATCGTGC CAGTCCTGTG
GGGTTCAGAA TTTTGCCGTC TTTGGTACCT CCATCTGGGA CGAAACCCTC TACAAGGCCT
GGTCGGAAAT CGTTACCAAC CTTATTCCCA ATATTCGTCT ACTGGAAACG CACTTGAGGA
ATTTTTGTCG CCTCTGCGAT GCCGACGAAG TAGTCCTCTT TGAACGCGCC ACCTTTTTGG
TCATTGCACA CGCGCAAGCG GCGGACGTGG GGGCGCTGGA GGGTAAAGCC GGTGCGGTGG
AAGACGATGC CACGGTACCC ACGGCCGTGA CGACCACTAC TCCGACTGCC GACGGCATGG
TACACGTGGA CGACGAACAC TCTGTGCATC AGAAACGTAC CGGCCATTTT GACGCCCACC
GTTTCGAAAA GATTTCCAAT ATTGTTAAGC AGTTCAAACT CAGTTGCGGC AAGGCACAGA
GTTCCTTTCA GGGCATGCAG GTGCGAAACT CGCGGTTCAG TGCCTTTATT GACGCCTTTA
CCGCCAACAC GTACATTATG GTGATCGTCT CCAATCCACA CGTCCAAACG GCCGCGACAA
TCTGGAACAT TCAAAACGCC CGGACCCATT TTGAAAAATT CATCCCTCGC ATTTAG
 
Protein sequence
MAKKKVLLMG KAHSGKTSMR SIIFANYLAR DTTRLSPTLD VEHHHVRFLG DVMLNLWDCG 
GQDAFFESYF ERDRETIFRS VELLIYVFDI ESESPEKDFD HFCGVLEAIE ENSPDARIFV
LVHKMDLVAP QDRAHVLRER ESLVAESCQS CGVQNFAVFG TSIWDETLYK AWSEIVTNLI
PNIRLLETHL RNFCRLCDAD EVVLFERATF LVIAHAQAAD KRTGHFDAHR FEKISNIVKQ
FKLSCGKAQS SFQGMQVRNS RFSAFIDAFT ANTYIMVIVS NPHVQTAATI WNIQNARTHF
EKFIPRI