Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_21147 |
Symbol | |
ID | 7204712 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 637603 |
End bp | 638858 |
Gene Length | 1256 bp |
Protein Length | 307 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185754 |
Protein GI | 219121045 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTGTTTGTG CATCGCATCC GCAGCTCCTA CTGGATCTAT CGTGCCGTGC CCCCATTCCC AAGTTACCTT CCCGACTACT CGTCTTCCGA ACGACGAAGT TGTGCACTGG GTAGTCATCA CGTCATCGAC TTCGTCTCGT ACACGTTTGG AAAGTGTGTC GGTGTTGTGT GGTGATTGAC AGTGTGATTG TAAAACCAGT GGTATCATGG CCAAGAAAAA GGTGCTCCTC ATGGGCAAGG CCCATTCCGG AAAGACCTCC ATGCGCAGTA TTATATTTGC CAATTACCTA GCCCGAGACA CCACGCGTTT GTCGCCGACG TTGGACGTCG AGCACCATCA CGTGCGCTTC CTCGGAGACG TCATGCTCAA TCTATGGGAT TGCGGAGGGC AGGACGCCTT TTTCGAGTCC TACTTTGAAC GCGATCGGGA AACCATATTC CGATCCGTCG AACTCCTCAT TTACGTCTTT GACATTGAAT CGGAATCGCC GGAAAAGGAC TTTGATCACT TCTGTGGAGT CCTAGAAGCG ATTGAAGAAA ACTCTCCCGA CGCCCGTATC TTTGTCCTCG TGCACAAGAT GGATCTCGTC GCACCGCAGG ATCGCGCGCA CGTTCTCCGC GAACGCGAAA GCCTCGTGGC CGAATCGTGC CAGTCCTGTG GGGTTCAGAA TTTTGCCGTC TTTGGTACCT CCATCTGGGA CGAAACCCTC TACAAGGCCT GGTCGGAAAT CGTTACCAAC CTTATTCCCA ATATTCGTCT ACTGGAAACG CACTTGAGGA ATTTTTGTCG CCTCTGCGAT GCCGACGAAG TAGTCCTCTT TGAACGCGCC ACCTTTTTGG TCATTGCACA CGCGCAAGCG GCGGACGTGG GGGCGCTGGA GGGTAAAGCC GGTGCGGTGG AAGACGATGC CACGGTACCC ACGGCCGTGA CGACCACTAC TCCGACTGCC GACGGCATGG TACACGTGGA CGACGAACAC TCTGTGCATC AGAAACGTAC CGGCCATTTT GACGCCCACC GTTTCGAAAA GATTTCCAAT ATTGTTAAGC AGTTCAAACT CAGTTGCGGC AAGGCACAGA GTTCCTTTCA GGGCATGCAG GTGCGAAACT CGCGGTTCAG TGCCTTTATT GACGCCTTTA CCGCCAACAC GTACATTATG GTGATCGTCT CCAATCCACA CGTCCAAACG GCCGCGACAA TCTGGAACAT TCAAAACGCC CGGACCCATT TTGAAAAATT CATCCCTCGC ATTTAG
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Protein sequence | MAKKKVLLMG KAHSGKTSMR SIIFANYLAR DTTRLSPTLD VEHHHVRFLG DVMLNLWDCG GQDAFFESYF ERDRETIFRS VELLIYVFDI ESESPEKDFD HFCGVLEAIE ENSPDARIFV LVHKMDLVAP QDRAHVLRER ESLVAESCQS CGVQNFAVFG TSIWDETLYK AWSEIVTNLI PNIRLLETHL RNFCRLCDAD EVVLFERATF LVIAHAQAAD KRTGHFDAHR FEKISNIVKQ FKLSCGKAQS SFQGMQVRNS RFSAFIDAFT ANTYIMVIVS NPHVQTAATI WNIQNARTHF EKFIPRI
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