Gene PHATR_21135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_21135 
Symbol 
ID7204692 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand- 
Start bp598482 
End bp599170 
Gene Length689 bp 
Protein Length174 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185913 
Protein GI219121376 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0706268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTTCACGCC ACGACGCTGA AAGCCACTAC GATCGTCTGT GTCCGTAAGG ATGGGCACGT 
ATGCATGATG GGTGACGGTA TGGTCAGCCA AGGATCGATT CAGGTGAAAC CCAACGCCGT 
CAAAATTCGG AGAATCCCGC ACAAGGGCGA CGATAAAGAA CACCAGGGTA CCATTGTCGG 
ATTTGCGGGT TCGACAGCGG ATGCCTTTAC GCTTTTGGAG CGGCTGGAAA TGAAGCTTGA 
TGAATATCCG GGACAGCTCG CGCGGTCATG TGTTGAATTG GCCAAGGGGT GGCGGACGGA 
CAAGTACCTC CGACGGCTCG AAGCGTCGTT GATCGTGGCC GACGCAACCG TGAGCCTGGA 
ACTGACTGGC AATGGTGACG TTATTGAAAG CCACGACGGT ATTTTGGGAG TCGGAAGTGG 
AAGTCCCTTT GCCATTGGTG AGTTGCGGCA GCTTTTCCCT TTCTTTCCGT GTTGAATTCG 
CTTGCCTGAC CATTTCTCTG CTTCCTTTTC AAGCTGCTGC TCGTGCCTTG ATGGATTCGT 
CTGATCTTGA CGCGGAAGCC GTGGCTCGGA AGGCAATGAA CATTGCCGCA GATATGTGCA 
TTTACACAAA CAAAGAGTTT CTTGTCGAGA CTATGGAGAC GAAGGAAAAG GAGGAAGAAG 
TTTAATTTAG GACTGAAAGT CACTTCTTC
 
Protein sequence
MMGDGMVSQG SIQVKPNAVK IRRIPHKGDD KEHQGTIVGF AGSTADAFTL LERLEMKLDE 
YPGQLARSCV ELAKGWRTDK YLRRLEASLI VADATVSLEL TGNGDVIESH DGILGVGSGS 
PFAIAAARAL MDSSDLDAEA VARKAMNIAA DMCIYTNKEF LVETMETKEK EEEV