Gene PHATR_21073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_21073 
Symbol 
ID7204647 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp386450 
End bp387038 
Gene Length589 bp 
Protein Length110 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185875 
Protein GI219121298 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0316064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTTGTAGTC ATCTTGAATA CAAAAAAAGT ACTTCAATAT GGTACGTTGG CGGTAATAGA 
ATAAAAGTGA ATTTATGCAG CCAAGGAATC GAGAGAAATG AAATCTAGGC AGGGGCGCGC
TTGGTGCGGT CTGTCGAGAC GTCCTTTTTG CGGACCGCAC TAATTTCATT GCCCTTCGTC
AAGAGTCTCA TTTAAGATGA CTGTACTCTG ACAACTGCTT TTGTTGAATT TGTAGCCTCC
GAAAGTCCAG CAAAAGTCGA AGGAGCAGAA AATGGCCGCC GCCATGGCGG GTGGCAAAGG
AAAGAAGAAG AAGTGGTCCA AGGGTAAGAG CCGCGACAAG GTCGATAATA AGGTTCTCAT
GAGTAAGGAA CAATTCGATC GCCTACATGA GGAAGTCCCT AAGATGAAGC TAATTACTGT
TTCCGCGGTT GTGGAAAAGC TTAAGATCTC GGGAGGACTT GCCAGGCGAG CACTTCGGGA
TCTTGCGGAC GAGGGTAAGA TTCGCCCTGT CTGCCTTTCT CGGGCGCAAC AAATTTACAC
TCGCCATGTT GGAGATGAAG AGTAAACTAA AACGCACAGC AAATTTATT
 
Protein sequence
MPPKVQQKSK EQKMAAAMAG GKGKKKKWSK GKSRDKVDNK VLMSKEQFDR LHEEVPKMKL 
ITVSAVVEKL KISGGLARRA LRDLADEGKI RPVCLSRAQQ IYTRHVGDEE