Gene PHATR_13538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_13538 
Symbol 
ID7204548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp484273 
End bp485172 
Gene Length900 bp 
Protein Length299 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185715 
Protein GI219120967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTACTTTCGG GTGGTTTAGC TGGAACGATA GCTTCGTGTT TGACGAATCC TCTTGAAGTC 
ATCAAAACGC AGCTTCAATC TTCAAGCACG GCGGCGGGAG ACATGGTTGC TGGTCGGGGA
CATCCCGTTG CCATCGCAAA ACGCATCATG GAGCAGGATG GTGTTTCAGG CTTTTTCCGC
GGCTTACCTC CGACCTTAGT GGGCATAATA CCTTCCAGAT CAGCCTACTT CTATTCCTAT
CAACAAATTA AGAAACGCCT CGGTCCGTAT CTTCCTGAAG GATCACCACC GAATGCGATG
TTGGCGGGCT TCATGGCAGG TATTACAAGC AATACGTTGA CAAATCCAAT TTGGATGGTT
CGTACGCGAA TGCAGCTCTT GGCAGACACG ACCGCAGGTC AACGAGCGTA TAATGGCTAC
GGCGACGCAA TCTCGACCAT TTGGAGAGAA GACGGGTTGA AAGGCTTCTA TAAGGGAATC
CAGGCCTCGT ATTGGGGTTG CGCGGAAGGC GCGGTGCAGT TCATCCTGTA TGAGCAGTTC
AAAACGAGAC TTTTAGGTCG TCTTAACGCC CAGCGGGCTG AGTGTGGACT GCCAGCAACC
GAGGAACTTC CTAAGATGAC TTACTTTTGG TCAGCTGCCG CGGCAAAAAT GTGTGCTTCC
ATTGCCACCT ACCCCCATGA AGTAGCACGC ACGCGAATGC GTGAGCAAGC TCGTGGAGGA
ATCTACAAAT ATAAGAGTAT GTGGCAGTCG CTGGCAGTCA TCAGTCAAGA AGAAGGAATG
AAAGGATTGT ACAGTGGTAT GGGCGTACAT CTGCTGAAGG TAGTGCCGAA CTCGGCGTTT
ATGTTTCTCA CATACGAGGT GGTGCGCAGC TGGCTCAGTG AATTTACTGT TGTAGATTAG
 
Protein sequence
LLSGGLAGTI ASCLTNPLEV IKTQLQSSST AAGDMVAGRG HPVAIAKRIM EQDGVSGFFR 
GLPPTLVGII PSRSAYFYSY QQIKKRLGPY LPEGSPPNAM LAGFMAGITS NTLTNPIWMV
RTRMQLLADT TAGQRAYNGY GDAISTIWRE DGLKGFYKGI QASYWGCAEG AVQFILYEQF
KTRLLGRLNA QRAECGLPAT EELPKMTYFW SAAAAKMCAS IATYPHEVAR TRMREQARGG
IYKYKSMWQS LAVISQEEGM KGLYSGMGVH LLKVVPNSAF MFLTYEVVRS WLSEFTVVD