| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_13511 |
|---|
| Symbol | |
|---|
| ID | 7204604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011679 |
|---|
| Strand | - |
|---|
| Start bp | 199703 |
|---|
| End bp | 202713 |
|---|
| Gene Length | 3011 bp |
|---|
| Protein Length | 939 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185839 |
|---|
| Protein GI | 219121222 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CCCTGGAACA TGTCGTTGAA ACTGCGAGAT CTTATCCGTA AAGTGCGGCA ATGCAAGACT
GCTGCGGAAG AACGGGCGGT CATTGCGAAA GAGTCGGCAA TGATTCGGAC AGCTATCCGT
GAGGAGCAAG CGCACTACCG CCACCGGAAC GTGGCGAAGC TGCTTTTTAT GCACATGTTA
GGTATGTGAC GCTTTCATGA GCGGATAGTA CGCTGGCACG TAGAAGCACA CCATGCGTTC
TGTGAGTTTT CTGATTACTG ACGGCCTGAC TTTGCATTGC TTATTTGTTC GAATCAGGCT
ATCCAACGCA TTTCGGTCAG CTGGAATGTA TGAAGCTCAC GGCCTCCCCT CATTTTCCGG
AGAAGCGCAT CGGTTATCTC GGAATGATGC TGCTCCTCTC CGAGGATGCT GACGTTCTGA
TGTTGTCTAC GAATGCCTTG AAGAACGATC TTACGTCGTC CAATAAGTTC GTTGCGGGTT
TGGCACTCTG TGCCATTGGA AATTTGGCCA CGGCTGACAT GTCTCGAGAT TTGGCTCCCG
AAGTAGACAA GCATCTCAAG TCTCCCATGC CATACATTCG CAAGAAGGCC TGTTTGGCCA
TGTCGCGTTG CCTCTCCAAG TGCCCTGACA TGGTGGAAGA CTTTATCGAT CGCGTCATTA
CCTTGCTCAA AGACAAATCT CACGGAGTTT TGATTACCGT GGCGCAGCTC ATGACACAGA
TTCTCATGAT CGATTTTCGG AATGCCGAAG AAGAAGGTGA AGATCCTTTT GCAACGCCTT
GCCGTCAAGC TTTTTTGCGA TTGGTCCCAA CGCTTGTCAA AATGTTACGC AACTTGTTGA
GCACAGGCTA CTCTCCCGAA CACGATATAG GTGGTATATC GGATCCATTC TTGCAAGTTC
AGCTTTTGAC TTTGCTTCGC TTGTTGGGTG CCAATAATGA AGAGGCTTCA GAAGAAATGA
ATGATGTGCT GGCACAGGTC GCGACCAATA CCGAAACATC TAAGAATGCG GGCAATGCCA
TTCTCTACGA GTGCGTACAG ACAATTATGG GGATCGAAAG CGAAGACGGT CTCCGTATTT
TGGCGGTCAA CATTCTTGGA CGCTTCCTCC TTAACCGTGA CAACAATATT CGTTACGTTG
CACTCAATAC CTTGGCACGA TGCATTATCG AGCAGAAACG CTCCGGAGAC ATGATTGAAA
CGGGTGACGG TGAAGAGACC AACAGTGCCA TGTCCGCTTT GCAGCGTCAT CGTACTACCG
TCGTGGAATG TCTAAAGGAT CCTGATGTCA GTATTCGCCA GCGCGCGCTA GAGCTCATTT
ACCATCTCGT CAACGACGAC AACGTGGAAT CGTTAACAGC TGAACTTCTG AACTACCTTG
TTCTTTGTCC ACGTGAACAT CGAGGCGATA TCTGTAGCCG CATCCTTCGT GTCGTCGATC
GATACAGCCC TGACGACAGG TGGAGAGTGG ATACGCTCAT CACTACCTTG ACCATTGCAG
GACGAGAAGC GGCGAGAGAT GTCCAGTCTT CAGCAGTTGT CTACATTTCT CGAGGAGGTG
AAGACATCCA TTCTTTTGCT ACACACAAAT TGATCAAAGC AATCAGAGAC GACGACGGGT
CGCAACACGG ACTGTTAGCC GTTGGTATCT GGTGTATTGG TGAGTACGGC GACCTGCTTT
TGAAGCCATA CACCTATACA CATCAGGCTT CCGATGTAGC TAATTTTTCT TCCAACGGTG
GGCTAATCAC TTTCCATGCA CTCGACTCGT CTTCGGTCAT TGACACGATT GAGCACGTAG
CAAAGCGTCA CGCCTGTCCA GAAATGGTAA AGCAACGAGC GTTGACTGCG TATGTAAAAC
TGAGCCAGAG ACTAGCCAAC AGTGGTGATC AGGCAGCACT GGACCGACTG CGGCAATTGC
TGAAGAACCA AAACATGTCA CACTCGTTGG AGTTGCAATT GAGATCCTGT GAGTATAGTG
CTCTGGTTAA TGCCAGCAGA GGCGTGACAG CGTCTGCTCC TGCTCCTGTA ACGGACGATA
TATTTGGCAT GACCAACGAT AACGCAGGTG GATCTGTAAG CGACGGTGTT ATTAATGCAG
CAAAGGAAGC TCTTGCCCGA ATGCCAGTTA TAGACATGAA GGTTCTTCAA AAGCGGCTTT
CTACCTCAGA TTGGGACGAT GACAGCACGC CTCGGATTCC ACGAGGTGCT GCCAAGAAGG
ATACAAGCGG TGGTGATTTA TTGGATCTTA ACGATATTTT TGGAGCTGCA CCAACGCCAG
AGACTACACA GAATGGAGCA ACCTCTGTTT CGGGAGCTGG AGAAACAGGA AAGAGTGATT
TGGATCTGTT GTCTGACATC TTCGCTGTGC AGGCAGCCAC TGGTTCGGCC GCGGCACCAG
TGAGCAATGG TACCTTTGAC TTGTTTGCAG CTCCCGTTTC ACAACCTGCC CCGGCTCCCG
TCGACCCGAT GGATTTGTTT GGTGCGCCTC CGGCTTCGAC GAATATTCCT GCCTCGACCA
ACAATGTGAT GGACCTTTTT GGTTCTTCCG CTCAAGGCCA AAGTATCCCT GCCCCACCCC
ATATGTCCCA ACCGATGGAC GACTTGTTTG GATCAGCGCC AGCTCTTGCG GGACCTAGTG
GTGTGAAAGT TTCTGGACCT AGCCACGCAG GCTTGTCGAT TGAATTTGAG TGCACGAAAC
CAGATACATT TAATCAGCAA AAGTCGGTGT TAACTGCCCA CTTCAAGAAT ACGTCAGGTG
ATACAATATA TGGAATGAAT TTACAGTGCG CTGTTCCGAA ATACGTGACA ATGGAAATGG
AGCCACCGAC CTCCACTACG ATTCCCGTCT CCGGTGGTTC AAGTGAGGAA GTTACCCAAA
AGATTACGGT AACAAATTCG ATGCTAGGCA CAAAGAACTT GATGCTCAAA CTCAAATTGA
GTTTCACTGC CACGGGAGAG AGGATAGAGC ACATGGCCAC TGCTTCTGGA TTCCCAGCTG
GTCAATACTA G
|
|---|
| Protein sequence | PWNMSLKLRD LIRKVRQCKT AAEERAVIAK ESAMIRTAIR EEQAHYRHRN VAKLLFMHML
GYPTHFGQLE CMKLTASPHF PEKRIGYLGM MLLLSEDADV LMLSTNALKN DLTSSNKFVA
GLALCAIGNL ATADMSRDLA PEVDKHLKSP MPYIRKKACL AMSRCLSKCP DMVEDFIDRV
ITLLKDKSHG VLITVAQLMT QILMIDFRNA EEEGEDPFAT PCRQAFLRLV PTLVKMLRNL
LSTGYSPEHD IGGISDPFLQ VQLLTLLRLL GANNEEASEE MNDVLAQVAT NTETSKNAGN
AILYECVQTI MGIESEDGLR ILAVNILGRF LLNRDNNIRY VALNTLARCI IEQKRSGDMI
ETGDGEETNS AMSALQRHRT TVVECLKDPD VSIRQRALEL IYHLVNDDNV ESLTAELLNY
LVLCPREHRG DICSRILRVV DRYSPDDRWR VDTLITTLTI AGREAARDVQ SSAVVYISRG
GEDIHSFATH KLIKAIRDDD GSQHGLLAVG IWCIGEYGDL LLKPYTYTHQ ASDVANFSSN
GGLITFHALD SSSVIDTIEH VAKRHACPEM VKQRALTAYV KLSQRLANSG DQAALDRLRQ
LLKNQNMSHS LELQLRSCEY SALVNASRGV TASAPAPVTD DIFGMTNDNA GGSVSDGVIN
AAKEALARMP VIDMKVLQKR LSTSDWDDDS TPRIPRGAAK KDTSGGDLLD LNDIFGAAPT
PETTQNGATS VSGAGETGKS DLDLLSDIFA VQAATGSAAA PVSNGTFDLF AAPVSQPAPA
PVDPMDLFGQ SIPAPPHMSQ PMDDLFGSAP ALAGPSGVKV SGPSHAGLSI EFECTKPDTF
NQQKSVLTAH FKNTSGDTIY GMNLQCAVPK YVTMEMEPPT STTIPVSGGS SEEVTQKITV
TNSMLGTKNL MLKLKLSFTA TGERIEHMAT ASGFPAGQY
|
|---|
| |