Gene PHATR_13459 details

Gene Information

• Locus tag: PHATR_13459
• Symbol: SytB
• ID: 7204714
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011679
• Strand: +
• Start bp: 644209
• End bp: 644991
• Gene Length: 783 bp
• Protein Length: 260 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002185756
• Protein GI: 219121049

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0504572
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGGCTT TTAACGGCAA ACCTTCCTGG GTTACTGATG TTGATCAAGT CGAGCAGTGT 
CTGGTCGATC TTCGTGCCCA AATGGAGGAT CTGCACAAAA TGCACGCATC CCGTGTCGGA 
TCGGTCTTTG GCAAAGACTT GGAAGATATG GAGGGCCGAA TCGAATCTCG AACTCGCGAA 
ATTACCGACC AGTTCCGAGT GGCCGAACGC ATTTTGCAAA AGGTAGGTGT GGCGACTCGT 
CGGGCGGGTG GAGAGGAAGC CACTGTCGGT GCCAACGTCC AACGGAGCCT CGCCAAGCGA 
CTTCAGGAGC TTTCCGTAAA TTTTCGACAG TCGCAGCGCA AATATCTGGC TGAAGTTAGG 
ACTCAGAAAA GTGGTGGGTT GGTTCCGGGT GCAGACAGTC GATTCGGCAT TGATTTGCAT 
ACAGAATCGT CGGGTGAATT CTTTACCACG CAACAACTAG CTGTCGTGGA TGACCTAACA 
GAGGCTGTAC AGTCTCGAGA TACTGAGATT GTAAAGATTG CACAGTCAAT TGAGGAGCTT 
GGAACAATTT TTAAAGAACT GGCGGTTTTA GTTATCGATC AAGGGACGAT TTTGGATCGC 
ATTGACTATA ATATGGAAGC GGTTGTGGAC CACACTAAGA CAGGCATCAA GCAACTCGAA 
AAAGCAGAGA AGCATCAGAA GAATGCTCGC CCATTACGAT GTATTATCTG CTTAAGCTCG 
TTAATATTTG TTCTTCTCGT AATTCTCGTT CTCAAACATC GGCCAAGGCG TGGTTGGTTT 
TAA 

 

Protein sequence

MEAFNGKPSW VTDVDQVEQC LVDLRAQMED LHKMHASRVG SVFGKDLEDM EGRIESRTRE 
ITDQFRVAER ILQKVGVATR RAGGEEATVG ANVQRSLAKR LQELSVNFRQ SQRKYLAEVR 
TQKSGGLVPG ADSRFGIDLH TESSGEFFTT QQLAVVDDLT EAVQSRDTEI VKIAQSIEEL 
GTIFKELAVL VIDQGTILDR IDYNMEAVVD HTKTGIKQLE KAEKHQKNAR PLRCIICLSS 
LIFVLLVILV LKHRPRRGWF