Gene PHATR_13396 details

Gene Information

• Locus tag: PHATR_13396
• ID: 7204606
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011679
• Strand: +
• Start bp: 211114
• End bp: 213156
• Gene Length: 2043 bp
• Protein Length: 680 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002185654
• Protein GI: 219120845

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCCGAACGAC TCTTTCGCTT TTCGGCGAGC AAGATTCCAC AGACGGCGGC TCAGGCAGGA 
TCTTCCAAGA TTCCCTTTGG AGGGGTCCTT CGGCCGTTGG CGCCCACAGG GCCCAACGAC 
GAAGAAATAG ATACCGTGCA GCCCGGAAAC GCTGGAATTG TGCGTTGCAA ACGCTGTCGT 
ACCTACATTA ACGCCTTTGT CTCCTGGTTG GATCAGGGAA AACGCTGGCG GTGCAACATT 
TGTGCGCAAA TGAACGACTG TCCCTCGGCA TACTTTTGTC ACCTCGACGA ACAAGGATTC 
CGTCGCGACC GGTTTGACCG CCCCGAACTC AGCAAGGGCG TTGCGGAATT TTTGGCTCCC 
GCCGAGTACA TGGTACGCCC ACCGCAGGAA CCCACATATT TCTTTGTCGT GGACGTGAGC 
GCCACCGCTG TCCGCAGCGG CATGTTGGAA AGCGTAGCGG CCGGCATCAA GGCGAGTCTC 
GATGATTTGC CCGGGCGGGG TCGTACCAAA ATCGGTTTCA TTACCTTTGA CAGCACGGTG 
CACTACTTCA ATCTAGCCGC CGATCTCTCC AGTCCGCAGA TGTTAGTCGT GTCGGATCTC 
AAGGAGCTCT TTGTCCCGCT CCCGGACAAT CTATTGGTCA ATTTGAAGGA ATCGCGGGCG 
GTGGTGGAAA CATTTCTTGA TAACTTGCCC GAAATGTTTG CCAAAAATCC GGTTGTGTCG 
CAGTCCTGTC TGGGACCGGC TCTCAAGGCC GCCTTTACTG TCATGAAACA GATTGGAGGA 
AAGATGTGCG TCTTTCAATC CATCATGCCA AATTTGGGCG ACGGCGCCTT GAAACCCAGA 
GAACAGCCCG GTATCATGGG AACGCCGAAC GAAGTCAAGC TACTAAAGTC TGATGTTTCG 
TGGTACAAAG ACACCGCCAT CGAATTTAGT CGTCAACAAA TCAGTGTCGA TATGTTCCTG 
TTTCCCTATC AGTACATGGA TCTGGCAGCT CTCGGCGAAC TTCCAAAGTA CACCTCCGGT 
TCCTTGTACT CGTACGTAAA CTTCCAACGC GCCCGCGATG CTCGCCGCTT CGAAGAGCAA 
CTCAACAAGA CATTGGTACA AACAACCGCC TTCGAAGCGG TAATGCGCAT TCGTTGTACC 
AAAGGCATCC GAATAACCAA CGTTTACGGA AATTTTTACA TTCGGGGCAC GGATCTCTTG 
GCGTTGCCCA ACTGCAATAC CGATTCAGTC TTTGCGTTCG ACCTGGCCCA CGACGAGCAA 
ACCGTGACGT CGAAATACGT AACGATCCAG GCGGCCTTGC TCTACACCAG CAGCGACGGC 
GAACGCCGCA TACGGGTCAT GACGCAAGCT CTGCCGGTCA CGTCGTTGAT GTCGGAAGTC 
ATTGCTTCCG TCGACTGTGA TGCCTGTTGT GCATTACTTG CCAAACAGGC TTTGGAAGTT 
TCACTCAAGT CCAGTCTAGA CAACGCCCGC ATGAAGCTCC AACAAGTATG TGTTGAAATG 
ATCAAAACAG CCAAGTCGGG CGATAAACGC ACGGTCTCGG GATACGCTGC ACCGCCACCT 
CCCGGACACT ACATTGCTAG CAGTGATGAA GACAAGCCCA TTCCGGAGCA TCTCGCACTA 
CTACCGCTTT ACACTTTGGC TACGATGAAG AACGTGGCCT TTCGAGGTGG GACGGATGTT 
CACCCCGACG AGCGTGTTCA AGCCCGTGAT TTGCTAAACG GGATGTGGGT GGAGGACTCG 
AAGCACTTTA TATATCCGCG AATGTTCACT ATTCATGACA TGGGCGATAA TGTAGGTTAT 
ACCTCCGAAG AAGAACCAGG AAACGAAAGT CCCAGTGAGC TGACGGCCGG TCGCGAGCAA 
ATTGTTCTCC CGCCCGTCGT GAATCTGAGT ATCGAGAATT TGACTAGCAA CGGCGTTTAT 
CTGTTGGACA ATGGCGTTGA CATGTACCTT TGGGTAGGGC GTACTGCTGA TCTTAATGTC 
GTTGGTTCAC TTTTTGGAGT CCATTCCTTG GACGACATCG ATCCGAATCA GGTAAGTCGG 
TGA 

 

Protein sequence

PERLFRFSAS KIPQTAAQAG SSKIPFGGVL RPLAPTGPND EEIDTVQPGN AGIVRCKRCR 
TYINAFVSWL DQGKRWRCNI CAQMNDCPSA YFCHLDEQGF RRDRFDRPEL SKGVAEFLAP 
AEYMVRPPQE PTYFFVVDVS ATAVRSGMLE SVAAGIKASL DDLPGRGRTK IGFITFDSTV 
HYFNLAADLS SPQMLVVSDL KELFVPLPDN LLVNLKESRA VVETFLDNLP EMFAKNPVVS 
QSCLGPALKA AFTVMKQIGG KMCVFQSIMP NLGDGALKPR EQPGIMGTPN EVKLLKSDVS 
WYKDTAIEFS RQQISVDMFL FPYQYMDLAA LGELPKYTSG SLYSYVNFQR ARDARRFEEQ 
LNKTLVQTTA FEAVMRIRCT KGIRITNVYG NFYIRGTDLL ALPNCNTDSV FAFDLAHDEQ 
TVTSKYVTIQ AALLYTSSDG ERRIRVMTQA LPVTSLMSEV IASVDCDACC ALLAKQALEV 
SLKSSLDNAR MKLQQVCVEM IKTAKSGDKR TVSGYAAPPP PGHYIASSDE DKPIPEHLAL 
LPLYTLATMK NVAFRGGTDV HPDERVQARD LLNGMWVEDS KHFIYPRMFT IHDMGDNVGY 
TSEEEPGNES PSELTAGREQ IVLPPVVNLS IENLTSNGVY LLDNGVDMYL WVGRTADLNV 
VGSLFGVHSL DDIDPNQVSR