Gene PHATR_13384 details

Gene Information

• Locus tag: PHATR_13384
• ID: 7204614
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011679
• Strand: -
• Start bp: 230693
• End bp: 232722
• Gene Length: 2030 bp
• Protein Length: 594 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002185844
• Protein GI: 219121233

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.407263
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAATCGT TTCTCTGGTG GAATGCACCT GAGCTTCCTG AAGGATGCCA ATGGCGCACA 
ATGGAGCATT CAGGAGTCAG TTTTCCGGAG ACCTACGAAC CACATGGAGT CAAAATGATG 
TATGATGGAC AACCAGTTGA ATTGACTCCC ATTCAGGAAG AAGCGGCTAC TTTCTTTGCC 
GCCATGGACC CCGAAGGTAT GCATCTGGGC AATCCCAAGA CAGGGAAAAT CTTCATCAAG 
AATTTTTTTG CAGACTTTCG GGAAATTTTG GGGAAGAAAC ATATCGTAAA GGAATTCAAA 
AAATGCGACT TTGAGCCCAT TCGAAAGCAT TTGAACGAGC AAAAGATCAT CCGAAAAGCC 
ATCACAGATG AGGAACGAAA GGCCAACAAG TAAGTCCAAA CAACAGCCAA AAACATGCTA 
GCCTTACCGA AAATAGCTCG TACTCAATCT TACTCTATTT GCACAGGGAG GACCGGAGTC 
AAACGCTTCA TCAATTTGGT TTTTCTATCG TCGATGGACA CATTGAACGA GTGGGCAACT 
TTAACATGGA ACCACCCGGC GCTTTTCGTG GTCGAGGAGA GCACCCTAAG ATGGGCAAGC 
TCAAGTCGCG CGTTTTGCCT GAACAAGTAT CGTTGAATCT AAGCGAATGC GCCCCTGTTC 
CCCCCTGTCC AGTTCCAGGG CACGCTTGGA GTGATGTTCG ACACGATCCG CGTGGGCAAT 
GGCTCGCTAC ATGGAAGGAA AACATCAATA ACCAGTCCAA GTACATGCAG CTGGCAGCGC 
AGTCTTCGTT TAAGGGAAAA TCAGATCGAT CCAAGTATAG CAAGGCTGGA TTGCTCTGTA 
AAAACATTGA AAAGATTCGC AAATCGTACA AGAAAGACCT GAAATCCAAG GACATGGAAG 
TTAAGCAATT AGCAACGGCA ACGTGGGTTA TAGATCGACT GGCACTTCGT GTTGGCGGAG 
AGAAGGATAC TGATGAAGAA GCAGATACAG TTGGTTGCTG CTCGCTGCGC GTGGAACACT 
TACATTTTGA TCCCAATGGC GAAGGTGGTG ATAGCAAAGA AATTGAGCTC GAGTTCCTAG 
GTAAGGATTC CATGCTTTTT AAACAGACGA TCGACTTTGG GGCGACCTTG TATAACGATA 
GCAACGGTCT GGGGGCGCAG GTCTACGACA ACCTAAAGTC TTTTTGCAAG AAGAAGAAAT 
CTTCCGAAGA AGTTTTTCAC GTAATCAATC CGACAATGCT AAACAACCAT TTGAAACAGT 
TCATGGACGG CCTTTCGGCC AAAGTTTTCC GTACGTACAA TGCATCCAAA ACGTTGCAAA 
CCGAGCTTCG TAAGTACGAG GTATCTCCTG CCTGGCGTAA CCTTACCGCA TCGGAAAAAG 
TCGTCGAGTA CAATAATGCC AACCGTGAAG TGGCGATTCT CTGTAACCAT CAGCGTTCGG 
TCAGCAAAGC TCAAGAAACT CAGCTTGAAA ACATCACAGC AAAAGTAGGC ATGTTAAAAA 
AACAGAAGAA AGATTTGAAG AAGATTCTCA AGCTGCTTAC GGCGGGAGAG GCTGATAAAA 
TTCCTACGAA AAAGTCACCT CAGACTATGA CTGATGAAGT ACAAAAGGCG CTTGAAAAGG 
CTAAAAAACT GAAGGATACG GCAAAGACAA ATGAGGAAAA GATCAGGGCT ACCGAAGCGG 
ACGAGAAGGC GAAAGCAAAG AAACGAGCTT TGGCCGACTC TAAGTTCCAA AAGGCGCACT 
TATGGGAGAA GGTACCGACA AAAGAGCAGG TTGTGAAAAA GATTGAAGCG TGGAACGGTA 
AGATAAGCAA AATGGAAATG GACCTTAAAC ACAAGGACGA CAATAAGGAG GTCTCACTCG 
GAACTTCGAA GATTAACTAT ATGGACCCCC GGATCTCAGT AGCATGGTGC AAACGAAACG 
AAGTTCCAAT TGAGAAGATC TTTTCCAAAA CGCTGCGCGA CAAATTCAAC TGGGCCATGG 
CAGTTGTGCC AGACTGGGAA TTTAACGAAC ACATTGCCAA AGAAGCTTAA 

 

Protein sequence

MQSFLWWNAP ELPEGCQWRT MEHSGVSFPE TYEPHGVKMM YDGQPVELTP IQEEAATFFA 
AMDPEGMHLG NPKTGKIFIK NFFADFREIL GKKHIVKEFK KCDFEPIRKH LNEQKIIRKA 
ITDEERKANK EDRSQTLHQF GFSIVDGHIE RVGNFNMEPP GAFRGRGEHP KMGKLKSRVL 
PEQVSLNLSE CAPVPPCPVP GHAWSDVRHD PRGQWLATWK ENINNQSKYM QLAAQSSFKG 
KSDRSKYSKA GLLCKNIEKI RKSYKKDLKS KDMEVKQLAT ATWVIDRLAL RVGGEKDTDE 
EADTVGCCSL RVEHLHFDPN GEGGDSKEIE LEFLGKDSML FKQTIDFGAT LYNDSNGLGA 
QVYDNLKSFC KKKKSSEEVF HVINPTMLNN HLKQFMDGLS AKVFRTYNAS KTLQTELRKY 
EVSPAWRNLT ASEKVVEYNN ANREVAILCN HQRSVSKAQE TQLENITAKV GMLKKQKKDL 
KKILKLLTAG EADKIPTKKS PQTMTDEQVV KKIEAWNGKI SKMEMDLKHK DDNKEVSLGT 
SKINYMDPRI SVAWCKRNEV PIEKIFSKTL RDKFNWAMAV VPDWEFNEHI AKEA