Gene PHATR_13358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_13358 
Symbol 
ID7204488 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp107403 
End bp108391 
Gene Length989 bp 
Protein Length178 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185824 
Protein GI219121191 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCCT CGGAAGAATT CTACATTGAC GACGAACGTC GTTTCCTCAT GAACTTGCTC 
ATGGTCGGCG CTGGTGCCGT TACCGTCGGA GGATTCGGAA TTCCCTACAT TCTCTTCTTT
GTCCCACCGG TACGTACCAA CCGGTCATCA CACCAGTCAA AGGCCTTTTG CGTGTGCGGG
AATTGGGACT GTGTGCCGAT TAGGAATGCA CACGAATTGT ACAAGCCGTA CGGAGATCCA
TCGTGTTGTC TCTTGCCTTT TTTGGGATGC GTCTCGAAGC TCGTTCTCAT TGATGGTACA
GTCTCTCACC AATAGTGTCC CGTTTGCGTG TCCTTCCTTC CATGGAAACA CACCTTTGTT
TCGTCTACAG GGCTCGGGAA CTGGTGCAGG CGGTATTCCG GCCAAGGACG CTCTCGGTAA
CGATATCATG GCCAAGGCCT ACCTGGATTC CAAGCCGGTC AATGATCGTT CCTTGGCTCA
GGGATTGAAG GGAGATGCCA CGTACGTATC CATACAACAC AAATTTACGG TTGTACACCT
CTTCGTACAC TAGCATTCAT CCAGATTACT CACTCGTGTG CATTCCTACA TAACTTGGTT
GTCACGTTCT CCAGATACCT TATTGTGAAG GAAGACAAGA CTTTGGAGAC CTACGGGTTG
AATGCTGGTA TGTCTAGAGG GATACATCCC TTTCCGGCCA CTCGAAATGG TCCCTTCTCC
TTTCGTTGTC TAACCCTATC GTGTATTTGA TTTACATTAT TCTAGTCTGC ACTCACTTGG
GATGCGTCGT CCCGTGGTCC GCCGCCAGCA ACAAGTTCAT GTGCCCTTGC CACGGATCCC
AGTACGCCCC CGATGGTGCC GTCGTCCGTG GACCCGCTCC TCTTCCTCTC GCCCTCGCTC
ACTGCGACGT TGGTGAGGAT GGCAAGATTA TGTTCTCCCC CTGGACCGAG AGCGATTTCC
GTACCGGAGA AAAGGGATGG TGGAACTAA
 
Protein sequence
MAASEEFYID DERRFLMNLL MVGAGAVTVG GFGIPYILFF VPPGSGTGAG GIPAKDALGN 
DIMAKAYLDS KPVNDRSLAQ GLKGDATYLI VKEDKTLETY GLNAVCTHLG CVVPWSAASN
KFMCPCHGSQ YAPDGAVVRG PAPLPLALAH CDVGEDGKIM FSPWTESDFR TGEKGWWN