Gene PHATR_13333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_13333 
Symbol 
ID7204762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp879046 
End bp879897 
Gene Length852 bp 
Protein Length284 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185801 
Protein GI219121142 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCCGTGATCG GAATCCTATC GCAGCCGCTA TCGTCGAACG TTGAAAGTGA CGATTACATT 
GCTGCGTCGT ACGCGAAATG GCTTGAAGCC GGCGGCGCAC GTAGTATTCC TATTCCTTAC
GACGCCGACG AGCACTTGGT GGAGGATCTC TTTCAGCAGA TCAATGGATT ATTACTACCA
GGAGGCGGCA GCGAAATGCC CCCCGCCGTC ACTTTTTTAA TGGACAAGAT TGTCAAAAGT
AATACTGATG GACTTTACTT TCCAGTCTGG GGAACTTGCT TGGGCTTCGA GTTTCTACTG
CAATATGCTG GTGGGCCGAC ATTTCTCGAG TCAGGCTTCG ATTCCGAAAA CGTGAGTTTG
CCATTGTACG AAGTCGAGCC CCGCGAGCTC TATGCGGATC CCATTGTTTA TTTGACGGTT
ACCCAACGTA ACGTGACAAT GAACAATCAT CAGCTAGGCG TGTCACCCGA CCGCTTTCGA
GACAATAATC TGGCAAGCCA ACTGTGGGAC ATTACATCCA TAAACACAGA TTCGAATGGC
CAACCATTCG TATCGACTAT TGAGCCACAC CATCCTGATA TATTTCCCAT TTATGGTGTA
CAGTATCATC CCGAAAAGAA TGCCTTTGAG TATTCCACGT ACCCCGGAAC GAATATTCCG
TACGAAGCCA TCGACCACTC ATCCGAAGGT TTGGACTTCT CCATTCGAAT GGCGCGATTT
TTCGTTGCCA AAGCACGACG GAGCCTCGAC TCCAAAGGAA ATTCGCACTT TTATACCAAG
TCTGACGTCT ACCCATCCAT TTATACTTAC CCGGTTCGGA CGGGTCTCAA GTTTGAACAA
ATTTACGTCA TA
 
Protein sequence
PVIGILSQPL SSNVESDDYI AASYAKWLEA GGARSIPIPY DADEHLVEDL FQQINGLLLP 
GGGSEMPPAV TFLMDKIVKS NTDGLYFPVW GTCLGFEFLL QYAGGPTFLE SGFDSENVSL
PLYEVEPREL YADPIVYLTV TQRNVTMNNH QLGVSPDRFR DNNLASQLWD ITSINTDSNG
QPFVSTIEPH HPDIFPIYGV QYHPEKNAFE YSTYPGTNIP YEAIDHSSEG LDFSIRMARF
FVAKARRSLD SKGNSHFYTK SDVYPSIYTY PVRTGLKFEQ IYVI