Gene PHATR_13313 details

Gene Information

• Locus tag: PHATR_13313
• ID: 7204603
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011679
• Strand: +
• Start bp: 198861
• End bp: 199550
• Gene Length: 690 bp
• Protein Length: 229 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002185651
• Protein GI: 219120839

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCTTTG CACTCACAAT GAGCAGCATG ACCGAAAAGG TTCTCCAAAA TCCCAAGTGG 
CCGCCGGAAT GGCCGTATTC CGCCGAGGAT TTCGCTCGTC AAGACGAAAG CGACGATGAA 
CTTTTCTACG AAAGTCCAAG GCTAGTCTAT CATATTGACG ATGCCGCCGT CGGAGCCCTA 
ACGCAGTACT ACGCCGAGGA GTTTAAAGAC GGCGATGATG TCCTCGATAT TTGCTCCTCC 
TGGGTCTGTC ATTACCCGAA TCAATGGAAA GGAGGAAAGG TCGTGGGTCT GGGAATGAAC 
GAGTATGAGC TCAGCCAGAA TCCGGTGTTA GATTCGTACG TTGTCAAAGA TTTAAACAAG 
GAGCCAACGA TTCCCTTCGA TGATAACAGT TTCGACAAGG TAACTTGCGT GGTCTCCGTC 
GACTATTTGA ACAAGCCGTT GGAAGTCTTC CAGGAAATTG GTCGTGTGCT ACGACCAGGT 
GGCGAATGCA TTCTTAGCAT GAGTAACAGG TGTTTTCCCA CCAAGGCCTT TCGTATCTGG 
CTCCAAACGA GTGACTTGGA ACACGTTTTC ATTGCTGGGA GTTTCTTCCA CTACGCTGAG 
AAGTTCGACC CTCCGTCGGG GAAAGATATT TCTCCAAACC CAGGCCGTTC CGATCCATTG 
TTTATAGTTA AAGCAGCTAA AAAGAAATAA 

 

Protein sequence

MPFALTMSSM TEKVLQNPKW PPEWPYSAED FARQDESDDE LFYESPRLVY HIDDAAVGAL 
TQYYAEEFKD GDDVLDICSS WVCHYPNQWK GGKVVGLGMN EYELSQNPVL DSYVVKDLNK 
EPTIPFDDNS FDKVTCVVSV DYLNKPLEVF QEIGRVLRPG GECILSMSNR CFPTKAFRIW 
LQTSDLEHVF IAGSFFHYAE KFDPPSGKDI SPNPGRSDPL FIVKAAKKK