Gene PHATR_13261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_13261 
Symbol 
ID7204655 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp439827 
End bp440769 
Gene Length943 bp 
Protein Length238 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185886 
Protein GI219121320 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.684824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCTCTCTTGT TTGACTGTGA TGGAGTCATA TTGGAAACAG AGGAGCTCCA TCGTTTGGCA 
TACAACAAGG CATTTCAAGA GTTTGGCTTG ACTATCGATG GGCTGCGGGT CGAATGGTCG
GTACGTCTTC GGACGAATCT TCAAAGCTAT CGTCAATTTG TCTCCCTGGT AATTGCTAAC
GACAACAGTC TGTATCAATT TTGCTTATCG CAGGTAGAGT ACTACGATAT TTTGCAGAAC
ACTGTGGGGG GCGGGAAACC GAAAATGTTT TTTCATTTTC GTAACACGTC CAAGGCCTTT
CCGATGGTTG GCGACAAAAA GGTCCCGGAG ACTGAGAATG ATCAGCAAGC CTTAATTGAT
CAGCTGCAGG CTTTCAAGAC GGACTACTTT AAAACTCTCT TGGAAACCGA AGGCAAGGCT
CGTCCTGGAG TCTTGGAACT CATGGACGCA GCCTTTGCCG ACCCAACCAT CGCCGTAGGG
GTTTGTTCAG CAGCTACCAA GGTATGTTGA GGTTGCAATG AACTATCTGT TTCTCAGTTT
TGTCTGTTCT ACGTTACGGA GAAGCACAAC TGTCTTTCCG TTTTAGGAAC CTGTATATGA
GTCTAACACT TCGCCTTTCT GATCATACAA TTAACAGGAA GCAGCCGTCA AAACATTAGA
TATAACTTTG GGACAAAGCC GCGTTGACAT GCTGGACGTG TGCATTCTCG GAGATGATGT
TTCGGCCAAG AAACCAGACC CTCTAATTTA TAACACCGCT AGAGAGCAGC TTGGCATGGC
TGCAAGCCAG TGCGTGGTGA TCGAAGATAG CTTGGTTGGG CTGCGTGCTG CCAAAGGAGC
AAATATGAAG TGCCTGATAA CGTATACGAG TAGTACTGAA TCGCAAGATT TCTATGCTGA
AGGGGCAGAC GCAAAGGTTC CTGATCTTGG AAGTCGTAAA GTC
 
Protein sequence
ALLFDCDGVI LETEELHRLA YNKAFQEFGL TIDGLRVEWS VEYYDILQNT VGGGKPKMFF 
HFRNTSKAFP MVGDKKVPET ENDQQALIDQ LQAFKTDYFK TLLETEGKAR PGVLELMDAA
FADPTIAVGV CSAATKEAAV KTLDITLGQS RVDMLDVCIL GDDVSAKKPD PLIYNTAREQ
LGMAASQCVV IEDSLVGLRA AKGANMKCLI TYTSSTESQD FYAEGADAKV PDLGSRKV