Gene PHATR_13230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_13230 
Symbol 
ID7204527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp387788 
End bp388246 
Gene Length459 bp 
Protein Length152 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185876 
Protein GI219121300 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00796928 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAGTGGGTTG AGAAATTTGA CGAGCTTTGT GACTACCGTG ATTTGATGGG TCACTGTCTT 
GTGCCCCACA CGTACTCAGA GAACCTTCCG CTAGCTCGTT GGGTCAAACG ACAAAGATAT
CAGTACAAGC TCATGAAGGA GGGGAAGCCT TCGACAATGA CTGAAGAACG TGTTGTTGCC
CTATCAAACA TTGGGTTTGT CTGGGACTCA CAGGGTGCCG CGTGGGGTGA GCGCCTCGGT
GAACTAAAAG ATTTTCGCAA AGCTTTCATG CATTGCAATG TCCCAAGTAA CTATAGCGAG
AATCCTCAAC TCGCTACATG GGTCAAATGC CAACGTAGGC AATACAAACT GCATGTGGAG
GGGAAGTCTT CCAATATGAC TTCAGACCGT GTTCGGGAGC TTGAAAGTCT GGGTTTTGAG
TGGGAGTTAC GAACATACAA GAAATCTCGT GTTTGCTAG
 
Protein sequence
QWVEKFDELC DYRDLMGHCL VPHTYSENLP LARWVKRQRY QYKLMKEGKP STMTEERVVA 
LSNIGFVWDS QGAAWGERLG ELKDFRKAFM HCNVPSNYSE NPQLATWVKC QRRQYKLHVE
GKSSNMTSDR VRELESLGFE WELRTYKKSR VC