| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46556 |
|---|
| Symbol | |
|---|
| ID | 7201698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011678 |
|---|
| Strand | + |
|---|
| Start bp | 694882 |
|---|
| End bp | 695932 |
|---|
| Gene Length | 1051 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180884 |
|---|
| Protein GI | 219120285 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000802712 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAACG CCGATGGTAT CCTAGAGGCT GCGCATCCCT ACTACCCACA CGCAAGCGAG
TACGGGCATG AGCTACCGCA GCAGCCACCC GAGGTCTGGA GTATCACCGA CTTTGGTCGA
GTCAATGAAC GTTCACGGGA CGGCAGCGTC CACGCGACAG ACGAAGTCTT CAACACCGCT
TCGCATTTTG CCGCCACCTT TCTCAGCTTC CTCGGCACGG TCCTACTCGT TGTGCAAGCT
AGCGCTCGAC ACGAACCGTG GAAAATTGTC AGCTTTAGTA TATACGGCGC GTCGCTCGTC
TTTCTGTTCG CCGCCAGTAC CTTGCACCAC GGCTTGACCG GAGTGCACGA AGCCTTCTTT
CGTAGACTGG ACTATCTCGC CATCTACCCC TTAATTTCCG GTACATTTAC CCCGCTCTGT
TTGGTCTTCT ACCATGACAG TCTTATTGGA TGGGTCTTTG GTGCCACCGT CTGGGCCATT
GCCATACTCG GCATGGTGGC CACTGCATTC TGGTTCCACA AAATTCCCAA ATGGTTGTCC
ATGACTGCCT ACATGACGCT GGGTTGGTTG GGAGCGTGCA TGACCTATTG GCTCATACCA
GTCTTGGGAA TGGATGGTTT TGGACTCTTT TTGTTCGGCG GAATCTTGTA CACCGGGGGA
GGATACGTTT TCTACACTGA ACGACCGAAC CCCTATCCCG GAACCTTTGG CTTTCACGAA
ATATGGCACG TGACGGTCGT ACTTGCCGCT ACCTGCCATT GGCTACTCAT GTACACTTAC
GTCCTGCCAT GGGAAAGCGC GACATGAGCA AGGCTGGGAC CAACTGGGAC GTGGCACTCG
GGGAAAGTGG ACGTATGTGT TGGACAGGAC TGTGCTACAA AGGGCTACGG TTTTCGAACG
CAATTCTTTG GCTCGTGGAC GATGCGCTGC CCTGCCTTTG ACCGCAATGC GTTGATGCGT
TGTCGGAGCT GCGCAAAGTT GAATATCCAA TGATCCCTGC TTTTGCTTTA CTGTTAAAGG
AAGCTCTACT TAGCGTCGGT AGTCGGGTCG G
|
|---|
| Protein sequence | MANADGILEA AHPYYPHASE YGHELPQQPP EVWSITDFGR VNERSRDGSV HATDEVFNTA
SHFAATFLSF LGTVLLVVQA SARHEPWKIV SFSIYGASLV FLFAASTLHH GLTGVHEAFF
RRLDYLAIYP LISGTFTPLC LVFYHDSLIG WVFGATVWAI AILGMVATAF WFHKIPKWLS
MTAYMTLGWL GACMTYWLIP VLGMDGFGLF LFGGILYTGG GYVFYTERPN PYPGTFGFHE
IWHVTVVLAA TCHWLLMYTY VLPWESAT
|
|---|
| |