Gene PHATRDRAFT_36392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_36392 
Symbol 
ID7201542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp342021 
End bp342788 
Gene Length768 bp 
Protein Length255 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180988 
Protein GI219120502 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGGA AAAAAGGACC CAACGCTAAG TCAGTGGCTG GCAAGGATCG AAAGGCGGAG 
AACGAGGCCA AAAAATACGC GGAAGAAGCC AAGAAACGCG AAGCCGCCGA GGCCAAGGAT
TGGGATAAGG GTGCGAACCT CAAAAAAACG GAACGAGAGG ATGCAGCTGC TCGAAAATCT
GATGAGGCGG CAAGAAGAGC CAAGGAGAAG GCCGAGCTAC TCGCTCAAGA AGAGGCCGAG
TTGGCTTCTG GTACGACTAC CAGAAAAGCA TCGGCTGGTG TGGCAAAGAA GAAAAAGAAA
GCGAAAAACG AGCTAGAACT ACTTGAAGAT GCTTTGCAAA AGGCGGCTGA TAAGAAGGTT
AAGAAGAAAA AGGCTGAGAT GATCAAAACG AAACAGGAGA CAGATAGACC AAAGGAAGAG
CCTGCCCCCA TGGATCCTTT GCTGGCCAAC ACGCATCAGA TGATGGGCGG GGATGAAGCC
CACGAAGTAG GACGACGAGC TAACAAGGCC CGTATGGAAT CTGAAGGAAC AAGCGGCATT
GAAGCAGCCC TCAAGGGACT CAACGTGAAA GTGCCGACAT CCGGAACTCT CGCCAAATCA
GCCAAGGCAT TGTACGTCGA GTTTGAGGAG CGAACAATGC CTGGAATCAA GGCGGACTAT
CCTGGGTTGA GGCTATCGCA ATACAAAGAA AAAGTATGGC AGCTCTGGAA GAAGAGTCCG
GATAACCCAG CAAATCAGAT GCCTCTACCG GACGCTACCA AGTTGTAG
 
Protein sequence
MAGKKGPNAK SVAGKDRKAE NEAKKYAEEA KKREAAEAKD WDKGANLKKT EREDAAARKS 
DEAARRAKEK AELLAQEEAE LASGTTTRKA SAGVAKKKKK AKNELELLED ALQKAADKKV
KKKKAEMIKT KQETDRPKEE PAPMDPLLAN THQMMGGDEA HEVGRRANKA RMESEGTSGI
EAALKGLNVK VPTSGTLAKS AKALYVEFEE RTMPGIKADY PGLRLSQYKE KVWQLWKKSP
DNPANQMPLP DATKL