Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_36392 |
Symbol | |
ID | 7201542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | - |
Start bp | 342021 |
End bp | 342788 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180988 |
Protein GI | 219120502 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGGGA AAAAAGGACC CAACGCTAAG TCAGTGGCTG GCAAGGATCG AAAGGCGGAG AACGAGGCCA AAAAATACGC GGAAGAAGCC AAGAAACGCG AAGCCGCCGA GGCCAAGGAT TGGGATAAGG GTGCGAACCT CAAAAAAACG GAACGAGAGG ATGCAGCTGC TCGAAAATCT GATGAGGCGG CAAGAAGAGC CAAGGAGAAG GCCGAGCTAC TCGCTCAAGA AGAGGCCGAG TTGGCTTCTG GTACGACTAC CAGAAAAGCA TCGGCTGGTG TGGCAAAGAA GAAAAAGAAA GCGAAAAACG AGCTAGAACT ACTTGAAGAT GCTTTGCAAA AGGCGGCTGA TAAGAAGGTT AAGAAGAAAA AGGCTGAGAT GATCAAAACG AAACAGGAGA CAGATAGACC AAAGGAAGAG CCTGCCCCCA TGGATCCTTT GCTGGCCAAC ACGCATCAGA TGATGGGCGG GGATGAAGCC CACGAAGTAG GACGACGAGC TAACAAGGCC CGTATGGAAT CTGAAGGAAC AAGCGGCATT GAAGCAGCCC TCAAGGGACT CAACGTGAAA GTGCCGACAT CCGGAACTCT CGCCAAATCA GCCAAGGCAT TGTACGTCGA GTTTGAGGAG CGAACAATGC CTGGAATCAA GGCGGACTAT CCTGGGTTGA GGCTATCGCA ATACAAAGAA AAAGTATGGC AGCTCTGGAA GAAGAGTCCG GATAACCCAG CAAATCAGAT GCCTCTACCG GACGCTACCA AGTTGTAG
|
Protein sequence | MAGKKGPNAK SVAGKDRKAE NEAKKYAEEA KKREAAEAKD WDKGANLKKT EREDAAARKS DEAARRAKEK AELLAQEEAE LASGTTTRKA SAGVAKKKKK AKNELELLED ALQKAADKKV KKKKAEMIKT KQETDRPKEE PAPMDPLLAN THQMMGGDEA HEVGRRANKA RMESEGTSGI EAALKGLNVK VPTSGTLAKS AKALYVEFEE RTMPGIKADY PGLRLSQYKE KVWQLWKKSP DNPANQMPLP DATKL
|
| |