Gene PHATRDRAFT_36358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_36358 
Symbol 
ID7201659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp257793 
End bp258857 
Gene Length1065 bp 
Protein Length354 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180972 
Protein GI219120469 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.218477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAAG GTGACGGCAA GAGCAAAAAG CGCAAAAAGA AAACGACTCC CACATCGACG 
TCCGGTGACA CCGACAGCTC GAGGGCACCC GCCCACAACC CCGAACCCCT CCGCGTCACC
AATAATATCA ACGTCCCCGT GCGTCACCAA ATCCGCATGG CGCAACTCAA CAAACAAGCT
TCGCGCCAGT CCAGTCCGGG CTTTCGACAA ACGCGTGTCC AGCGCACTGC CTACCGACGA
TCCTGGGACG AGGAAGAAAT TGTACAAAAA GCCGAAGAAC GTCGGCGCAA AGGTCAGGAT
CCCAATTGGG ACGTGATTTT GAACCGGACT TCCACCGCTC CGCTTGTCAT TGTCGATGGC
TACAACGTCA TATACAAATG GTCGAGATTG AAAAAACACA TGGTCAAGGG GGATCCGCAA
AAGGCCCGTC AACTATTGAC GGACGATTTG GAAAATTTGC GATCGCTCAA GGGCTGGCGG
ATAGAGTGCG TCTTTGACGG TACTAGACGC TCTACGGTTG GACCGCTTGG TCATGGACCG
GGCAACAGCA ATACGCCGAC GGGAATGGAC AAGATCACCC GGGCATCCGT TTCCAAGCAC
GGAGTCCGTG TAGTCTTTAC CGGCGTAGGT ATTGAGGCCG ACAGCTATAT CGAATCGCGA
TGCGCCCGCG CCAAGAATTT GACACATGGC GAATTGACGG GCTCTTTCAT TGTTGCCACA
GATGACGCCA TGATTCGCCT GGCGGGGCAG AATGCCGGGG CCTTGTGCAT GAGTACGGAT
CGTTTCGTAA GCGAGCTGAA GGCCGTCAAG AAGGCTGTGG AATATCGTGT AGAGGCAGCC
ATAGCCAAGG CTAACGGACA CGCCATTCGC CCGAAAAGTT TACGCGGCAA CAATCTACAT
AGATTTGGTC GTCGTTCGGT ATTGATTGAA GATAAACGGA ATCGTACCAA GGTGGTCAAG
CCGGAAGCAG TGTACGAATT GGATATAGAT ATCGAAGTGG AAGAGGACGA GAACGGGATA
CCTTGGTGGG CCAAAGCACC CAATCAGACG AACCCATACA GATGA
 
Protein sequence
MGKGDGKSKK RKKKTTPTST SGDTDSSRAP AHNPEPLRVT NNINVPVRHQ IRMAQLNKQA 
SRQSSPGFRQ TRVQRTAYRR SWDEEEIVQK AEERRRKGQD PNWDVILNRT STAPLVIVDG
YNVIYKWSRL KKHMVKGDPQ KARQLLTDDL ENLRSLKGWR IECVFDGTRR STVGPLGHGP
GNSNTPTGMD KITRASVSKH GVRVVFTGVG IEADSYIESR CARAKNLTHG ELTGSFIVAT
DDAMIRLAGQ NAGALCMSTD RFVSELKAVK KAVEYRVEAA IAKANGHAIR PKSLRGNNLH
RFGRRSVLIE DKRNRTKVVK PEAVYELDID IEVEEDENGI PWWAKAPNQT NPYR