| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_28056 |
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| Symbol | |
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| ID | 7201888 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011678 |
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| Strand | - |
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| Start bp | 942142 |
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| End bp | 944703 |
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| Gene Length | 2562 bp |
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| Protein Length | 757 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181110 |
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| Protein GI | 219120756 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAAAATTGCA GCAGATCTTT TGTGACACGT CCATAAATTT TGATAGAGCT TTATGCCAGC
CGTCAAACTT CCAAAAAGCT ATCTCGATCA ACAATGAAAA TCACAACCAC CGCTACGCTT
GGATTCCCTC GGATGGGGCC GAATCGCGAG CTCAAGTTTG CTCTGGAAAA GCATTGGAAA
GGATCGCTGA GTGAAGTGGA TCTTATCAAG GTTAGCGAAG ATGTTGAGAC TATGGGTTGG
AAGCTTCAGA AGGAAGCCGG TATCGACCTG ATCACAGTGG GTGATATGTA CCTCTACGAT
TGTGTTTTGT TTTGGATTGA GTCGCTGGGA ATAGTGCCTC ATCGCTTCGA GAATTTGGCG
GCTGGGACGA CGCGTATGTT TTCCATGGCT CGAGGTGTTG ACGGTGCCGA AGCTCTAAGT
AAGATGCTCT TTCTTGATTC GCCTCATATT ATCCATTCGA CACGAGAATC CTCCTAACAA
GCCTCTTTCT TTTCCATGTT GTGCTAATGT GAATAGGCAT GAAAAAATGG ATCACGAGCA
ACTACCACTA CATGGTTCCT GAGTTCGACA AGTCATCTAA GATTGCGCCT GACTTTTCCT
CCTTCATTTC CAGTGTTGAG CGAGGCGTCG GGGTTCTCGG AGCTGAATGC GCCATACCTG
TTGTGTTGGG ACCCGTTTCC ATCTGCTTTT TTGCGCGCAT CGTCGACGAC GCTCTGACCA
CGCATGAGTT GATTGCTTTG TTGATTCCTG TGTACAAAAC TCTTCTGCAG AAGGTTGCCG
ATCTGGGAGT GAAAGAAATT CAGATTCATG AACCTGCAAT CGTCCTCGAA GAAGTTGGGC
TTATCGCCTC TTTGAAGACC GTTTATCCAG CCATCCTGCC GAAAGGCCCG AAGATTAATT
TCGTTACCGC TATGGACGAT GTAGGGAAAG CTAATTATGA TTGGCTTATC TCGGAGTCGA
ACGGACTTAA CATCCTTTCG ATGGACTTCA CCCGTGGAAA TACACTTGGA TTGATCGAAA
AGCGAGGATT TCCCTCCTCT AAGATGCTTG GCGCGGGCCT CGTTGACGCT CGCAATGTTT
GGAAGGTCGA CCCCGGTAAA GTCCTTCCGC TCACCGACAA GCTGAAGTCT CTAGGGATTG
AGTTTCGTGT ACAACCTTCT ACATCTTTAC AATACACTCC TTGGGACTTG GATCGTGAAA
TGCAATTGGA CAACCACCCG GCAGCTCAGG TTCTCTCCTT TGCAAAGCAA AAGTTAGACG
AACTGGTGCT TCTAGCGCAG GCAATATCGG GTGAGAAGTC AGCACTCGAT ACGCATACGG
CAGCTTGGAC CACCTTCCAC TCTGCCCATA CGGGCTCTAC TTTGACGAAG GAACGAATCA
AGCACTTGAA AGAGACTGAT TTTCGCCGTC CCGAGCCGTA CAAGCAACGC CGTCCGAAGC
AATTGGTCGG CGTACCACTC CTACCCACGA CCACTATTGG ATCCTTCCCA CAAACCAGCG
AAATCCGGCG ACTTCGATGG GAATGGAAAA AGGGTAGGCT GACCAACGAG GCGTACGAGA
GGGCCATGGA CCAGCACATT GCTTACTGTA TTGGTATCCA GGAAGCTATC GGCATAGATA
TCTTGGTGCA TGGTGAGCCT GAACGGACGG ACATGGTTGA GTTCTTTGGT CAACAAATGG
AGGGAATTCT CTTTTCGGAA CATGGGTGGG TCCAGTCATT CGGCTCTCGT TGCGTCCGTC
CTCCTATTAT CTGGTCAGAT ATTCAGCGAC CTAAGGCGAT GACAGTGCGC GAGTTCAAGG
TTGCCCAGGA TTTAACGTCA AAACCGGTGA AAGGCATGCT GACTGGTCCA ATTACTATTC
TGAATTGGTC TTTCCCTCGT GTCGACGTGT CTCGCAAAGA GCAAGCGTAC CAACTTGCTC
TTGCTATTCG GGATGAAGTA GCTGATCTGG AAAGTGCTGG CTGCAAGGTC ATTCAGGTGG
ACGAGCCTGC TCTTCGTGAG GGAATGCCAC TCCGAACCGC CCAAAAGGAA GAGTATTTGA
CGTGGTCTGT TGACGCCTTT CGCCTGGCAA CTGCGGTTGC TGCGAGCGAG ACACAGATTC
ACACTCACAT GTGTTACTGT GAGTTTAACG ACTGTATGGA AGCAATTGAT AGGCTCGACA
CGGACGTAAA CTCAATCGAG AACGCACGCA GTGACAACGC GACCTTAGAA GCCTTTCAGC
GCGTCGGATA CGAAAAAGGT TTTGGCCCTG GCTTGTACGA CATTCATTCA CCTGTTGTCC
CACCAATCGA CATCATGTAC GAAAAACTCA GCAGTTTTTT GAAGGTTCTT GACGTCGAGC
ACACCGTCGT CAACCCCGAT TGTGGTTTAA AGACGCGAGG GTGGCCAGAG ACGATCTTGG
CCTTGAAGCA CATGGTTGCA GCTGCTCATA ATGTTCGCAG AAATCTCGGA ATCGAAACGC
AGTAAGGTGA TGCCAGCAAT TATGTAGACG AGCATTGGTC TGACAGTTAA GATGTTTACG
TCAGATTCAT GGAGGCAAAA GTAGACCCAT TGGTGATTTC TC
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| Protein sequence | MKITTTATLG FPRMGPNREL KFALEKHWKG SLSEVDLIKV SEDVETMGWK LQKEAGIDLI
TVGDMYLYDC VLFWIESLGI VPHRFENLAA GTTRMFSMAR GVDGAEALSM KKWITSNYHY
MVPEFDKSSK IAPDFSSFIS SVERGVGVLG AECAIPVVLG PVSICFFARI VDDALTTHEL
IALLIPVYKT LLQKVADLGV KEIQIHEPAI VLEEVGLIAS LKTVYPAILP KGPKINFVTA
MDDVGKANYD WLISESNGLN ILSMDFTRGN TLGLIEKRGF PSSKMLGAGL VDARNVWKVD
PGKVLPLTDK LKSLGIEFRV QPSTSLQYTP WDLDREMQLD NHPAAQVLSF AKQKLDELVL
LAQAISGEKS ALDTHTAAWT TFHSAHTGST LTKERIKHLK ETDFRRPEPY KQRRPKQLVG
VPLLPTTTIG SFPQTSEIRR LRWEWKKGRL TNEAYERAMD QHIAYCIGIQ EAIGIDILVH
GEPERTDMVE FFGQQMEGIL FSEHGWVQSF GSRCVRPPII WSDIQRPKAM TVREFKVAQD
LTSKPVKGML TGPITILNWS FPRVDVSRKE QAYQLALAIR DEVADLESAG CKVIQVDEPA
LREGMPLRTA QKEEYLTWSV DAFRLATAVA ASETQIHTHM CYCEFNDCME AIDRLDTDVN
SIENARSDNA TLEAFQRVGY EKGFGPGLYD IHSPVVPPID IMYEKLSSFL KVLDVEHTVV
NPDCGLKTRG WPETILALKH MVAAAHNVRR NLGIETQ
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