Gene PHATRDRAFT_28009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_28009 
Symbol 
ID7201695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp686753 
End bp687658 
Gene Length906 bp 
Protein Length267 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181054 
Protein GI219120640 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATATCCAGGT AGACCTTCAC GACGCCAACA ATAGAGAAAG ATTGCTGGAC AGGTAGATAT 
TATGAGTATT TCGGCCTTTC AACTTCCTGC GATGGGTCCA ATAGCGGCTC CGCCCGGATT
ATGGGGCGCC GGCATCGCGG CTTTTCAAGG ATTGGTTATC TCCTCGAGTT TTTCCACCGA
AATAAAAAGC CCCACCCTGT ACTCGAAGTT CGCCGCAGGC AAAAAGCTAG ACAATCCTAT
TTCGAGCCAG AACGGCATGT TTCGCATTTA CGTACCTTCG GCAATTGTAG CAACTCTAGG
CGCACTGGCT ACATACGGAA CGAAAAATTT CCGGTTTGCT CTGCCGCTAC TGGCATTGCA
TTTCTGGAAA CGTAGTGCGG AAGTTGCTTT CGTTCACAAC TACTCGGGCA CCATGCCGGC
GGCGAGCGCC AATACCATCT CGACCTATTA CACACTCACG ACCATTCTCG TCGGCGCCAC
GGCTTTGCCC TTGAAGGATG TATTGGACGG GTTCAAAACG GCCGCGGTCA CGCTTTTTTC
TGTTGGTACG CTTGGAAACG CTTATCATCA TCTGTTGCTC GCAAAGCTGC GCAGTTCGAA
AGATCCAAAT AACGACAACA GGCAGTACAT TCCACCAAAG GGTGGCCTTT TTTCACTCGT
GGCAGCTCCT CACTACATGT TCGAACTGGT GGCTTGGCTT GGAATTGCCT GCGCCGCACA
GCAGGCCAAC GCTTTCTTAA CCTTTGCGTC CATGTGCTCC TATCTCGCCG GAAGGGCTTA
CAAGACGAAC GAAATCTATT GCAATCAGTT TAATGAGGAT GAATGGCCGC GTAGTCGCAA
AAATATGCTT CCTTGGCTGT TCTAGTCTCA ATACTTCACA ACTGGATAAG CTCTATATGC
ATTAAC
 
Protein sequence
MSISAFQLPA MGPIAAPPGL WGAGIAAFQG LVISSSFSTE IKSPTLYSKF AAGKKLDNPI 
SSQNGMFRIY VPSAIVATLG ALATYGTKNF RFALPLLALH FWKRSAEVAF VHNYSGTMPA
ASANTISTYY TLTTILVGAT ALPLKDVLDG FKTAAVTLFS VGTLGNAYHH LLLAKLRSSK
DPNNDNRQYI PPKGGLFSLV AAPHYMFELV AWLGIACAAQ QANAFLTFAS MCSYLAGRAY
KTNEIYCNQF NEDEWPRSRK NMLPWLF