Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_27889 |
Symbol | |
ID | 7201645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | + |
Start bp | 186900 |
End bp | 187753 |
Gene Length | 854 bp |
Protein Length | 234 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180774 |
Protein GI | 219120054 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.731837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAACACTCGT CCTTCCGCAA CAACAGCCAA ACCATACTCT CTCCAAAGAT ATTCTCTTTA CCTCGCCGCC TGTCTTATTT GACGGTCGTA CTTGTCACAC AGACGCAAAG TCTCGCTTTT TCAGCATCAA CGTCAAGCCA GGGTTTCAAA ATGGCCCCAA CAATCAAAGT CATCCCCAAC CAAAAGCTTT ACGTCTCCGA GCCCGACCCC AGTTGGTTCG GCAATGGACC CAATTCCTCC TCTGATCCAG CATGGACGAA CGAAAACTGG CTAAAATCTC GATTTCACTT TTCTTTCGCC GAGTACAGCA ATCGGGCCAA TCAAGATTTC GGTGTCTTAC GCGTCATGAA CGACGACCTG GTGCAACCTC GACGTGGGTT CGGTACGCAT CCCCATGGGG ACATGGAAAT AGTCACGTAT ATTGTAGATG GTGAGTTGTC GCACCAAGAC TCCATGGGCA CCAAGGAAAG TCTCGGCCGC GGTAGTATTC AATTCATGAC TGCCGGTACA GGGGTTCGAC ACTCGGAATT CAACGACGGT GATGAGCCAC TCCGGTTCAT TCAAACATGG ATCAAACCTG CAGCCCGGGG ACTAAAGCCC AACTACGGTT CTTACAAGGG AAATCCTGAA GCCCGAAAGA ACCAAATGCA TCATTTGGTT TCCAATGTCA AAGACTCCTC GGTGTCAACT CCAGTCGAGA TTAATCAGGA TGTCGATGCT TTTGCCTCTG AAATTGAATT GGGTAAGAAA GTCATCCATG AGCTTCCCAA GGGACGCCAG GCCTATCTGT TGTGCATCGA GGGCAGCGTG AAAGTAAACG GCCACGAGCT GCACAAGTAC GATGCCTGCG AGAT
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Protein sequence | MAPTIKVIPN QKLYVSEPDP SWFGNGPNSS SDPAWTNENW LKSRFHFSFA EYSNRANQDF GVLRVMNDDL VQPRRGFGTH PHGDMEIVTY IVDGELSHQD SMGTKESLGR GSIQFMTAGT GVRHSEFNDG DEPLRFIQTW IKPAARGLKP NYGSYKGNPE ARKNQMHHLV SNVKDSSVST PVEINQDVDA FASEIELGKK VIHELPKGRQ AYLLCIEGSV KVNGHELHKY DACE
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