Gene PHATRDRAFT_27889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_27889 
Symbol 
ID7201645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp186900 
End bp187753 
Gene Length854 bp 
Protein Length234 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180774 
Protein GI219120054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.731837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAACACTCGT CCTTCCGCAA CAACAGCCAA ACCATACTCT CTCCAAAGAT ATTCTCTTTA 
CCTCGCCGCC TGTCTTATTT GACGGTCGTA CTTGTCACAC AGACGCAAAG TCTCGCTTTT
TCAGCATCAA CGTCAAGCCA GGGTTTCAAA ATGGCCCCAA CAATCAAAGT CATCCCCAAC
CAAAAGCTTT ACGTCTCCGA GCCCGACCCC AGTTGGTTCG GCAATGGACC CAATTCCTCC
TCTGATCCAG CATGGACGAA CGAAAACTGG CTAAAATCTC GATTTCACTT TTCTTTCGCC
GAGTACAGCA ATCGGGCCAA TCAAGATTTC GGTGTCTTAC GCGTCATGAA CGACGACCTG
GTGCAACCTC GACGTGGGTT CGGTACGCAT CCCCATGGGG ACATGGAAAT AGTCACGTAT
ATTGTAGATG GTGAGTTGTC GCACCAAGAC TCCATGGGCA CCAAGGAAAG TCTCGGCCGC
GGTAGTATTC AATTCATGAC TGCCGGTACA GGGGTTCGAC ACTCGGAATT CAACGACGGT
GATGAGCCAC TCCGGTTCAT TCAAACATGG ATCAAACCTG CAGCCCGGGG ACTAAAGCCC
AACTACGGTT CTTACAAGGG AAATCCTGAA GCCCGAAAGA ACCAAATGCA TCATTTGGTT
TCCAATGTCA AAGACTCCTC GGTGTCAACT CCAGTCGAGA TTAATCAGGA TGTCGATGCT
TTTGCCTCTG AAATTGAATT GGGTAAGAAA GTCATCCATG AGCTTCCCAA GGGACGCCAG
GCCTATCTGT TGTGCATCGA GGGCAGCGTG AAAGTAAACG GCCACGAGCT GCACAAGTAC
GATGCCTGCG AGAT
 
Protein sequence
MAPTIKVIPN QKLYVSEPDP SWFGNGPNSS SDPAWTNENW LKSRFHFSFA EYSNRANQDF 
GVLRVMNDDL VQPRRGFGTH PHGDMEIVTY IVDGELSHQD SMGTKESLGR GSIQFMTAGT
GVRHSEFNDG DEPLRFIQTW IKPAARGLKP NYGSYKGNPE ARKNQMHHLV SNVKDSSVST
PVEINQDVDA FASEIELGKK VIHELPKGRQ AYLLCIEGSV KVNGHELHKY DACE