| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_20905 |
|---|
| Symbol | |
|---|
| ID | 7201865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011678 |
|---|
| Strand | - |
|---|
| Start bp | 829084 |
|---|
| End bp | 830684 |
|---|
| Gene Length | 1601 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181081 |
|---|
| Protein GI | 219120696 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTTGTGA CAGACACCGT AGAACAGTTC CGAACAAAAC CCTAATCATG ACGAGTCGTT
GTAGAGTGCT ATTCTCGAGG ACGCTGGGTC CTCGGTTTCC AAAGTACGTC GGTAGTAACC
GTCGAGCCCT GTCGATGGAT GGCAGTGGCG GCGCTCACAA ACCGGACAAG GACAATGCCA
TCCCCAGCAA CGGTCGCAGT GATCCAACGG CAGGAGTGGA ACCTCCTTCC ACCTACAAGA
CTAGACTTCG GCAACTTATG GGAAAATCAC TCCAGCCACC AGGTACGTGA GATTTGGATA
CCTTTCCGTC AATCGGAACC TTTCGTGTCC CCTGCACTCC TGGCATACGA CACACACCGT
TAGATATACA CAAACATTCT TGGACGTGAG TACTGACGCA TTTTACTGTG GTCTCGGTTG
CTTTACTCGC TCTACTTTAC ACACACACAC GCGCAGCCGG ACGCTTGTGG GCACCCGACG
TTCTCAGCGA CGATGAAGAC GACGACAACG ATTACCGCCA ATTCATTCCG CAGATTGCCT
TACACGAAGG AGACGGCCGC GCACGTAAGC GTGTTTTGGT CCTGTGCACC GGTGGAACCC
TCACCATGGC TCCGGATCCC AATCAAGGTG GGGCGCTGGC TCCGGTGGAA GGGGCGCTGT
CCCAGTATAT GCGGGAAATG CCCGAACTAC ACGCCGACAA CATGCCAGAA GTGGTCCTAC
ACGAGTACTT CCCCTTTTAC GATAGTTCCG ACCTAGGTCC GGCCGATTGG GCCCGTCTCG
CCCACGATAT TCGCGCCAAC TATTTGCATT TCGACGGTTT CGTCATTGTC ATTGGGACCG
ACACCATGGC CTACTCGGCC ACCGCACTTT CCTTCATGTT GGAAAACCTC GGTAAACCGG
TCATCTTCAC GGGCAGTCAA ATACCCATGT GCGAACCGTA CAATGACGGG AGACGCAACC
TCATTATGGC GCTTATTTTT GCCTCGCGCG ATACCATCAA CGAAGTCAGC ATCTTTTTTC
ACGATCGTTT GTTGCGGGCC TGTCGCGCTA CCAAGGTCAA TACCCACCGC TTGTTGGCCT
TCGACTCGCC CAATCAGGAT CCACTCGCTA CCATTGGTAT CACCATTGAC GAAAACGAGC
ATCTCGTATT GCCGCCCGCC AAGGGCGCTC TGCGGGTGCA CTCACGGATG GACACCAGAG
TGCTGACTAT TCGACTCGTC CCGGGCTTTG ACGACGCCAT GATTCGAGAA ATGATCAATC
ACAATCTCCA AACGAACCTG CTCCGTGCAC TCGTACTGCA ATTGTACGGC ACGGGAAACA
TTCCCTCCGT TAAGGAAAGT TTCATTCAAC TCTTGGCCGA CGCCTCGGAC AAGGGCATCC
TGGTCGTCGC TTCGACCCAG TGTTACACCG GCTCCGTCAT GATGGGACAT TACGCCGTCG
GTAAGGCGTT GGAAAGTGCC GGTGTCGTCA GCGCCGCCGA TATGACGCAA GAAGCGATTG
CCTGCAAGGT AGGATATCTG TACGGACGAG GTGACCTCTC GCACGCCGAG GCGAGTAATC
TTATGGGGGT TTCCCTGCGG GGAGAAATAA CCCCCCAAGA A
|
|---|
| Protein sequence | MAPDPNQGGA LAPVEGALSQ YMREMPELHA DNMPEVVLHE YFPFYDSSDL GPADWARLAH
DIRANYLHFD GFVIVIGTDT MAYSATALSF MLENLGKPVI FTGSQIPMCE PYNDGRRNLI
MALIFASRDT INEVSIFFHD RLLRACRATK VNTHRLLAFD SPNQDPLATI GITIDENEHL
VLPPAKGALR VHSRMDTRVL TIRLVPGFDD AMIREMINHN LQTNLLRALV LQLYGTGNIP
SVKESFIQLL ADASDKGILV VASTQCYTGS VMMGHYAVGK ALESAGVVSA ADMTQEAIAC
KVGYLYGRGD LSHAEASNLM GVSLRGEITP QE
|
|---|
| |