Gene PHATRDRAFT_20809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_20809 
SymbolAroB 
ID7201792 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp335277 
End bp336725 
Gene Length1449 bp 
Protein Length431 aa 
Translation table 
GC content50% 
IMG OID 
Product3-dehydroquinate synthase 
Protein accessionXP_002180805 
Protein GI219120119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAGTTTCTT CTAGCCGTCG GGTCTGATCT TGTAAATATT TGGAAAACAA TCATGACGAG 
AAGAGACGTG TTGTTCCAAA TTCTCTGGTG TTTAGGATCT GCTACCGTTT CCGACGCATT
CATCCCGGGA ACGGTAGGAC GATTTCCGAT TGTTCCCCCG GTGGCGAGCA CCGCCATCCG
TGGCAACGAT CTGGGCAGCA ACACCGTCCA CAAGGAGAAT TTTGACATTG TTAGAGTGGA
TTTGGACGAT GGACGAGACT ATCCCATTTA CATTGGCACG GGGTATTCGG AAGAACAAGG
TGCGTCGGAG TGTCGAACGT GTTGGGGGAG GGACATCATC CTCCTGTTTT CTCACTGTCG
TATTCCCCTT TTGGTGCGTT CCAATACTGT TATGTTGCAG CAACGGAAAT TCTGCAATCT
CATATCAAGG GAAACAAAGT TCTGATTGTG ACGAATGATC GTATCGCTCC CATGTATTTG
GAAAAGTACG CAAATCTACT CAAGGCCGGC GACAAGCTGT CGGTAGAGAC GTTGGTGGTG
CCCGACGGAG AAGAGCACAA AAATATGGAA ATCATGCAGA CCATTCTCGA CAAATGTTTG
GAGACCAGTT TGGATCGGAA AGCGACACTA GTGGCCCTGG GTGGCGGGGT AATTGGAGAC
ATGGTTGGCT TTGCGGCCGC CATTTACCAG CGGGGAGTTA ACTTTGTCCA GGTACCGACC
ACCGTCATGG CCATGGTGGA TTCGTCCGTC GGGGGAAAAA CGGGAGTAAA TCATCCGGGT
GGTAAAAATA TGATTGGAGC CTTTCATCAG CCACAGTGCG TCTTTGTGGA TACGGAGACG
TTATCGACCT TGCCCGACCG GGAATTGCAG AGTGGGATTT CCGAGATTGT CAAATACGGA
TTGATTCGGG ATAAGGAATT CTTTGAGTGG CAGGAGGATC ACATGGAACG AATGATGGCC
CGAGACCCAG AAGCTCTGCG TTTCGCCATT ACGCGATCTT GCCAAAATAA GGCCGCGGTG
GTCAAGGCGG ACGAGAAGGA AGCCGGCCTT CGCGCCACTC TCAACCTGGG GCATACGTTT
GGACACGCTA TTGAAAATCA CTCCGGGTAC GGTACGTGGT TGCATGGTGA AGCCGTTGCA
ATTGGTACGG CCATGGCAGC GACAATGAGT GCACGAATGG GATGGATCGA GCCCCAGCTA
GTACAGCGAA TATACAAACT TTTGGAACGT GCCAAACTGC CGGTCGAGCT TCCACCGGAT
TCTCCAATGG ACCGCGATTC GTTCTTGAAA CTGATGAGTG TGGATAAAAA GGTCGAAAAC
GGTAACTTGA GATTAATCCT CCTGAAAGGA GCGCTGGGAA ATTGTGTGTT TACCGGAGAT
TTCGACGAGC AAGCCCTTTT GGACACAATT GACGAATTTG TAGCGGAATG CTCCGGAGTG
AAAAAATAA
 
Protein sequence
MTRRDVLFQI LWCLGSATVS DAFIPGTVGR FPIVPPVAST AIRGNDLGSN TVHKENFDIV 
RVDLDDGRDY PIYIGTGYSE EQATEILQSH IKGNKVLIVT NDRIAPMYLE KYANLLKAGD
KLSVETLVVP DGEEHKNMEI MQTILDKCLE TSLDRKATLV ALGGGVIGDM VGFAAAIYQR
GVNFVQVPTT VMAMVDSSVG GKTGVNHPGG KNMIGAFHQP QCVFVDTETL STLPDRELQS
GISEIVKYGL IRDKEFFEWQ EDHMERMMAR DPEALRFAIT RSCQNKAAVV KADEKEAGLR
ATLNLGHTFG HAIENHSGYG TWLHGEAVAI GTAMAATMSA RMGWIEPQLV QRIYKLLERA
KLPVELPPDS PMDRDSFLKL MSVDKKVENG NLRLILLKGA LGNCVFTGDF DEQALLDTID
EFVAECSGVK K