Gene PHATRDRAFT_20787 details

Gene Information

• Locus tag: PHATRDRAFT_20787
• ID: 7201661
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011678
• Strand: -
• Start bp: 266602
• End bp: 268739
• Gene Length: 2138 bp
• Protein Length: 473 aa
• GC content: 55%
• Product: predicted protein
• Protein accession: XP_002180975
• Protein GI: 219120475

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0430146
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGCCAGTCGA ACTAAATACC TTCCATCCTT CTGGATTGTG TGAGAGTGTG TATTAGCGCC 
CCGTCGCCTC GCATTGCACC TATATCCATC CATGGCTCTT CGTCTTTCTC TTTCCAAGGT 
ACGTAGACGC TAAATTCCGA ATGTATGGGT GGGATGTTGC GGTGGGCAAC ACAACGTCGT 
GTGCCGGCAG CGACATGGCA ACCGACACAC GCGGTGCTCC CCCTATCTTG TTGCTGTGGT 
TGTGTGATTG TGTAATGATT CCATCAAAGT TGCTGGTTCA GTGTCAAATG ATTCCGTGTT 
GTACAAATTT GTGGAATCAC ACACGAATGG TGTTTGAAAG TCTCTCACTC GCGTTTCCGT 
TGCCCCACCA TTTTTCGTTG CGACAGTGGA GTCGTCCGAC GGCTCGCGCA TCGTCGCGAT 
GTGCCTTATC CACCGCCACG GCCGCCTTTC CGGATTACGT CTTGCGGGCG CCGACGACGG 
ACGTCACGAC GTTGGATTCG GGATTGCGCG TGGCGTCCGA AACGGTGCAA GGGTCGGAAA 
CGGCCACGGT GGGCGTCTGG ATCGACGCCG GGTCGCGCTA CGAAACGGCC CGGAACAACG 
GCGTCGCCCA CTTTCTCGAA CATTTGGCCT TTAAAGGGAC GGAACAACGG ACCCAGCCGC 
AACTCGAACT CGAAATCGAA AATATGGGGG GACACCTCAA CGCCTACACC TCGCGCGAAC 
AGACCGTGTA CTTTGCCAAG GTCTTTAAGG ATGACGTCGG GAAAGCCGTC GAGATTCTTT 
CCGATATCCT CTTGCACTCC AAGTTGGACG AGGCCGCCAT TGACCGGGAA CGCGACGTCA 
TTCTCCGCGA AATGGCCGAA GTCAACAAGC AACAGGAAGA ATTGGTGCTC GATCATTTGC 
ACGCCACCGC CTTTCAGGGA ACCGGACTCG GACGTACCAT TCTCGGTCCG GAAGAGAACA 
TCCGCTCCCT TTCGCGTACC GACCTCGTTG ATTACATTCA GCAACACTAC ACCGCGCCCC 
GGATGGTCAT TGCCGGAGCC GGAGCCATTG ATCACGATCA GCTTTGCGGA CTCGCGAGTC 
AGCACTTTGG TGAATTGCCC ACCGCACCCA AGGATGGACT CGAACTCGCC ATGGAACCAG 
CCATCTTTAC CGGATCGGAT TATCTGTAAG TTACCCATCG CGATTGTAGT TGTAGCTGCA 
GTTGTCGTGG CTATGACGTT GTGTCCTTGT GCCGTGGATG GTTCGGACGA TGATTTCGTT 
CTTGTGCCGG GGGACACGTT CCGTCTCGGG GAGGGTTTCT TTTTTCGCGC GCTCGTCACT 
GTTTTTTAGA TTATCCACTC CACCTACTCA ATCTCACTCA CCCACGTGTA CCTCGCCGTT 
TCGCTCCCCT TTCCAGCGTC AAGTTTAACT CGGACGACAC GGCCCATATT GCCATTGCCT 
TTGAAGCCGC TTCGTGGACT TCCGAATACG CTTTCCCCCT CATGCTCATG CAAATCATGC 
TCGGATCCTA CAACCGCACT CAGGGACTCG GACGCAACCA TGCTTCTCGC CTCTGCCAAG 
AAGTGGCCGA ACACGAACTC GCACATTCGG TCAGCGCCTT TAACACGTGC TACAAGGATA 
TCGGTCTCTT TGGCGTCTAC ATGGTCGCCC CCGACAAAAA GGTCGACGAC CTCATGTGGC 
ACGTCATGAA CAATCTCGTC CGCTTGGTCC ACACACCGTC GGAAGAAGAA GTCGAACGCG 
CCAAGCTCAA CCTCAAGGCT ATTATGCTCA TGGGGCTGGA CGGACACGCC AACGTGGCCG 
AAGACATTGG CCGCCAATTG CTCACGTACG GACGCCGCAT GACGCCGGCC GAGATCTTTT 
CGCGTATCGA CGCCGTCACC AAGGACGATA TTCGAGCAAC GGCGGCCAAA TTCATCAACG 
ACCAAGATCA CGCCCTCGCG GCCGTCGGAG GAATCCATGA ACTGCCCGAC TATACTTGGG 
TCCGCCGCCA TTCCTACTGG CTGCGTTACT AGACACACAC ACGCACACAC ACGTGTGTTG 
GTGGAGTCGG CGGGACAGAA TAGTGGCGAA AAACGCGAGC GAGGATCGTC GCTATTATAC 
ATGGTAACGA GAAAGTAAAG ACCAAAAAAA GACCTTTG 

 

Protein sequence

MALRLSLSKW SRPTARASSR CALSTATAAF PDYVLRAPTT DVTTLDSGLR VASETVQGSE 
TATVGVWIDA GSRYETARNN GVAHFLEHLA FKGTEQRTQP QLELEIENMG GHLNAYTSRE 
QTVYFAKVFK DDVGKAVEIL SDILLHSKLD EAAIDRERDV ILREMAEVNK QQEELVLDHL 
HATAFQGTGL GRTILGPEEN IRSLSRTDLV DYIQQHYTAP RMVIAGAGAI DHDQLCGLAS 
QHFGELPTAP KDGLELAMEP AIFTGSDYLV KFNSDDTAHI AIAFEAASWT SEYAFPLMLM 
QIMLGSYNRT QGLGRNHASR LCQEVAEHEL AHSVSAFNTC YKDIGLFGVY MVAPDKKVDD 
LMWHVMNNLV RLVHTPSEEE VERAKLNLKA IMLMGLDGHA NVAEDIGRQL LTYGRRMTPA 
EIFSRIDAVT KDDIRATAAK FINDQDHALA AVGGIHELPD YTWVRRHSYW LRY