Gene PHATRDRAFT_13125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_13125 
Symbol 
ID7201681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp624469 
End bp625395 
Gene Length927 bp 
Protein Length308 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181040 
Protein GI219120610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.005765 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTGACGAAA ATGTTCCGGG TCCCGGTCTG CGACGGAGCA CCACCAAGAT TCTACAAATC 
AATATTGGTC TCTACTGTAA CCAAGCATGT GGACATTGTC ACGTGGAGAG CTCGCCCTTG
CGCCAGGAAA TGATGACGGC AGAAACGGCT GCCCAGTGTC TCCGGTTGTT AGAACACTCG
CCCTCCGTGA CTACTCTGGA CATTACGGGA GGGGCGCCGG AGCTCAACGC ACACTTTCGG
TACCTGGTCC GAATGGCCCG GTCCCTTCGA CCCGATCTAG AAATCATTGA TCGGTGCAAT
CTGACCGTCT TGCAGGAACC GGGACAGGAA GATCTGGTCG AATTTCTGAA AGAAAACGGT
GTGCGCGTGA TAGCCTCCTT GCCGTGCTAT TCCGAAACGA ATGTCGATCA ACAACGGGGA
AGTGGAGTAT TTGAACGATC CATTGCTGCT TTGTTGGCGC TGAACGAGGC GGGGTACGCC
GTTCCGGGAT CGGGGTTGCA TTTGGATTTG GTGTACAATC CGCTCGGAGC CTTTTTGCCT
CCGGAACAGA CCAAATTGGA AGCGCAGTAC AAATCGCAGC TGGCCGACAA TTTCGGTATT
TTGTTTGACG CCTTGTTCAC CATGACGAAC ATGCCGATTA AGCGTTTTGC GGATTTCTTG
CACCGCCGTG GGGAGCTCCA GGACTACATG GAATTACTGG TGCGCAACTT CAACGCGGGA
ACGATAGAAT CTGTCATGTG TGTGAATACC GTATCCGTCC GTTGGGATGG CAAGGTGTTC
GACTGCGATT TCAATCAGCA ATTGGGTTAC GGTATGGGTA AGGATTTGAC CGTGTTTGAT
GTGGAATCGT TGGAGGAGTT GCAAAAGCAT GAGATTCGGA CGGACAATCA TTGTTTTGGA
TGTACGGCCG GTATGGGATC GAGCTGA
 
Protein sequence
LDENVPGPGL RRSTTKILQI NIGLYCNQAC GHCHVESSPL RQEMMTAETA AQCLRLLEHS 
PSVTTLDITG GAPELNAHFR YLVRMARSLR PDLEIIDRCN LTVLQEPGQE DLVEFLKENG
VRVIASLPCY SETNVDQQRG SGVFERSIAA LLALNEAGYA VPGSGLHLDL VYNPLGAFLP
PEQTKLEAQY KSQLADNFGI LFDALFTMTN MPIKRFADFL HRRGELQDYM ELLVRNFNAG
TIESVMCVNT VSVRWDGKVF DCDFNQQLGY GMGKDLTVFD VESLEELQKH EIRTDNHCFG
CTAGMGSS