Gene PHATRDRAFT_13093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_13093 
Symbol 
ID7201582 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp520594 
End bp522381 
Gene Length1788 bp 
Protein Length495 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180847 
Protein GI219120207 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGCGAGTCGC AACAAGAAAA GGCGGTTGAG AAATTTCAAC GCGAGCTGCA AGATAACGTG 
TACAAAAACG GTGGCCAAGT CCGGGACTAC CAGGCAGAAG GCATATCATG GATGCTGTCG
AATTATGTTA ATCAGCGATC TTCAATTCTG GCTGATGAGG TATGTAGATT TTTTTTTAAC
AAGTACACTT CAATTGCTGC GCATTCGCTT ACTGCCTCTT TTCTCTCTTC AAAAGATGGG
TCTCGGGAAG ACCCTCCAAA CTGTCGGGAC TGTCAACATT ATGGCGACAC GCCTTAACGG
AAACGGTGTC TTTCTGGTGA TCGCTCCGCT GTCGACTCTT TCACATTGGG AGCGGGAATT
CAAGAGGTGG ACCGATCTAA ACACGATTGT GTATCATGGA TCAGGTGACG ACCGGCGGCT
AATAAGGGAG CTTGAATTCG CATACGAAGA TGACCGACCA AAGAATACGG TTGGTTTCAA
TCAGCTGTAT TTGAAAAAGT GCAAGCCAAG AAAGCCAGGC AGTGGTGAAT CTCCTTGGAT
GGTTCAAGTC GTTATAACGA CACCCGAAAT GATTGTGGCG GACGACTTCG TTGAACTGAC
GGCTGTCGAC TGGGATGCCG TGATTGTCGA TGAAGCGCAC CGGTTAAAGA ACCACAACTC
GAAGCTTGCT ATCAATCTTC GAGACAATCG CTTCAAGTTT GACCATATTA TTCTGCTTAC
CGGCACACCG ATTCAAAATG ATGTCCAAGA ATTTTGGACG CTACTGAATT TTATCGATCC
TAATGGATTT GACGACGTTG ACAAATTTAT GACGAAGTAC GGCGACATGA AAAGCAAAGA
GCGCGTTGAT GAGTTGCACG AAGAAATAAG GCCATTCATT TTGCGGAGAC TGAAAGAAGA
CGTCGAGAAG AGTGTGCCAC CCAAAGAAGA GACTTTGATT GAAGTTGAGC TAACATTGTC
CCAGAAGCAA TACTACCGAG CATTGTATGA AAAGAATGTA AAATTTCTCC ACAAAAACAA
CAAAAAGGCT CTTGACGGTC CCAGTCTCAA CAATCTTGCG ATGCAGCTAC GAAAGTGTTG
CAATCATGTC TTTCTTCTCA AGGGTGTTGA AGAAGAGTTT AGGAATAAAG GAAGTCTTAC
TCTTTCGGAA GCTGATTTTC TCGTTCAAGG ATCGGGAAAG CTGATCCTGC TAGACAAGCT
ACTCCCTCGT CTCAAAAGCG AGGGACACCG AGTACTCGTG TTTTCACAGT TCAAGATTAT
GCTCGATATT CTTGAGGATT ATTTTTCAAT GCGGGAAATG AAGTTTGAGC GCATTGACGG
TTCCATCACT GGTAAACGGC GACAGCAAGC AATCGATAGA TTCCAAGCCC CAGAGATTGA
TGGGAGAAAA CCACCGTTTA TTATGATGCT TTCTACAAGA GCCGGTGGTA AGTGTGTTTC
AATTGTGTAG CGATGAGTAG CTCAAGAATC TGCTCACGCT CTACCTTTTA CTTCTAACCT
AGGGGTCGGA ATCAACCTGA CTGCTGCCGA CACTTGGTAG GTTTTCCACC ACGATTATCC
TCGATTGAAG ACGCAGCATT CTTATTCCTA ACATTTTGGT TTGGTCCTTT CAGCATTATT
TTTGATTCAG ACTGGAACCC GCAGAATGAT TTGCAAGCCC AAGCGCGATG TCACCGAATT
GGGCAGACGA AGGAAGTCAA AGTATATCGC CTCTTGACAA GAAAGACGTA CGAAATGCAA
ATGTTTCATA TGAGCTCGAT GAAAATGGGA CTTGATCAGG CTGTCCTT
 
Protein sequence
SESQQEKAVE KFQRELQDNV YKNGGQVRDY QAEGISWMLS NYVNQRSSIL ADEMGLGKTL 
QTVGTVNIMA TRLNGNGVFL VIAPLSTLSH WEREFKRWTD LNTIVYHGSG DDRRLIRELE
FAYEDDRPKN TVVVITTPEM IVADDFVELT AVDWDAVIVD EAHRLKNHNS KLAINLRDNR
FKFDHIILLT GTPIQNDVQE FWTLLNFIDP NGFDDVDKFM TKYGDMKSKE RVDELHEEIR
PFILRRLKED VEKSVPPKEE TLIEVELTLS QKQYYRALYE KNVKFLHKNN KKALDGPSLN
NLAMQLRKCC NHVFLLKGVE EEFRNKGSLT LSEADFLVQG SGKLILLDKL LPRLKSEGHR
VLVFSQFKIM LDILEDYFSM REMKFERIDG SITGKRRQQA IDRFQAPEID GRKPPFIMML
STRAGGVGIN LTAADTCIIF DSDWNPQNDL QAQARCHRIG QTKEVKVYRL LTRKTYEMQM
FHMSSMKMGL DQAVL