Gene PHATRDRAFT_13057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_13057 
Symbol 
ID7201725 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp840204 
End bp841307 
Gene Length1104 bp 
Protein Length156 aa 
Translation table 
GC content56% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180907 
Protein GI219120333 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.61386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGAAC TCAAAGTTGA GGATGCCCTT CTCTACCTGG ATCAGGTCAA GGTAGAGTTT 
GGTGATCGTC CGCACATTTA CAACGAGTTT CTCGACATAA TGAAAACCTT CAAAACACAG
CAGATCGACA CACCCGGCGT CATCCGGAGA GTATCGACAC TTTTTCAAGG AAACCGCCGA
CTCGTACTAG GATTCAACAC CTTTCTCCCG GAAGGCTACA AAATCGAACT CCCCCTCGAC
GGCGACGGCC CGCCGGTGGC CGTCTTTCGC GCTCCCGGCT CCAACGTCGC ACACATTTTG
CATGCTTCCC CCAACAACGT TCCTTCCGCA CACAATGCCG GCGGCGCCCC GGCCTTGGCA
CACGTGGCCA ATCTCGCGCA GGGACACGCC GCCCGGGGAC CGGCGGCGTT GCCCCCGCAG
CAGGCACACG GACCTTCCGG GACGCTCCGG GGACCACATC ACGATCATCA CCAACAACAG
CAACACCAGC AGCCACCGCA ACAACATCAG CCACAACAAC ACCAGCAGCA GCAGCAACAA
CACAACTTTA GTCAGGACAA TGGCATGCGC ATGGCCATGG GACCCGGAGC AATGCCTCCC
CAGCAGCATG CGCAACAGCA ACAGCAGCAG CAGCAGCAAC AACACCATCA ACAATCCTCT
ATGGTCCCTC GGCAAGGGCC CGCACCGTCG GCATTAGGAC AGCGAGCGCC GGCTCCAACA
GGAAAGTTAC GATCGCCTTC GGCTCCGCAG AGGCTCGGGC CACAACACGG AGGACAGCCA
GTTGCGCCAC AGGGAGGGCC GCCATTGCAG CAGCAGCAGT ACATGATGAA CATGCCTCCT
GAAAACATAC GTGGACAGGG TCCACCTCCA CCGGCACAAC AGGGAGCTCA GCCAGAAGCG
CCCATGGAAT TCAACCACGC GATCAACTAC GTTACCAATA TCAAAAAACG GTTTGCGAAT
GAGCCCGAAA CGTATAAAAA ATTTCTGGAG ATACTGCACA CGTATCAAAA AGAACAGCGG
GGCATTAAGG AGGTTTTGGA CGAAGTTTCG GAACTTTTTG CGGAGCATCC TGATCTGCTT
AAAGAGTTTA CGTTTTTCTT GCCG
 
Protein sequence
MRELKVEDAL LYLDQVKVEF GDRPHIYNEF LDIMKTFKTQ QIDTPGVIRR VSTLFQGNRR 
LVLGFNTFLP EGYKIELPLD GDGPPPEAPM EFNHAINYVT NIKKRFANEP ETYKKFLEIL
HTYQKEQRGI KEVLDEVSEL FAEHPDLLKE FTFFLP