Gene PHATRDRAFT_13004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_13004 
Symbol 
ID7201762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp164999 
End bp165514 
Gene Length516 bp 
Protein Length171 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180768 
Protein GI219120041 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00979759 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGCT CTTGCCTCTT ACCCGCTTCA GGATTTCACG AGCGCCAGAA ACTTGCTATG 
TGTGCTGTTC ATGCAATAAA TAACATTGTT CAGTCATCCA AGTACTCCAA AACAGATTTT
GATTCGATTT GTGAACAGTT GTCGCCCTTA ATATGGTTCA ATCCGCATCG AAGCGCTTTC
AGCATAGGAA ATTACGACGT GAATGTTGTT TTGCTGGTTT TACAAGCAGA GAATTGTTCT
GTCCTCTGGC ACGATAGACG AGGACTAGTC ACTACACACG ATCTGGATAT CCACGATGCT
ATTCTCTGGA ATGTTCGTTC AGAGACGTGG TTGGGGCGCA TCGCTGGCTG GAGACATTGG
ATTGCACTCC GGGTACGTGA CGGTTGTTGG ACGAATTATG ATTCCCTTTT CACAGAACCA
CAAGATATTG GGAACAGCAA GCAATGCGCA GCTTTACTCA ATTCCGAAAA AGATGGACAT
GTTCTGCTCA TACATTTCCC GTGTACCGAG GATTAG
 
Protein sequence
MSSSCLLPAS GFHERQKLAM CAVHAINNIV QSSKYSKTDF DSICEQLSPL IWFNPHRSAF 
SIGNYDVNVV LLVLQAENCS VLWHDRRGLV TTHDLDIHDA ILWNVRSETW LGRIAGWRHW
IALRVRDGCW TNYDSLFTEP QDIGNSKQCA ALLNSEKDGH VLLIHFPCTE D