Gene PHATRDRAFT_5423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_5423 
Symbol 
ID7201422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp150912 
End bp151589 
Gene Length678 bp 
Protein Length226 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180581 
Protein GI219119652 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCACTCGTGA TTTTGAATTC CCCGATCCGA CAACCACCAA GTCCGCTATT CGACGCCCTG 
TGGAAGAATG CGGCGTACCG CGTTTGTGCC GATGGCGGGG CGAATCGACT ACACAAGGCA
ACGCGAGGAA AGGACTACGT TCCTTCTTTG ATACGAGGGG ATTTGGATTC TTTGGACGAT
CACGTACGTG ACCACTATCG GCAGCTTGGT TGTGTCATTG AGCGGGAATC CGATCAGAAC
AGCAACGATC TAGACAAGGC CCTGACCGCT GTGGAACGAG AAGGATACAA AAGCTGCTGC
GTCTATGGGG CGTTTGGTGG AAGGTTCGAC CAGGAAATGG GATGCTTCCA AGCTTTGTAT
AAATGGGACT CTCGCTTTGA CGAACTTTGG TTGTACGATG ACCAAACCTG TGCGATACTC
CTACCAGCCG ACCAAAACCA CGAAATATAC CTGGTACATT CCAAAGAAAT CACGGATCCG
ACTGTTCCCG GTGAGGGTCC AACTTGCGGA TTAATACCCT TGAGTGTACC CTGCGACTCT
GTGTCTACCA CTGGTTTGCA GTGGAATTTG GAAAACCAAC ATACGGCTTT CGGCGGCTTG
GTTTCGACCT CCAACCGAGT GGTCGAAGAC AAGGTTACCG TTCGCAACTC CCATCCTCTC
ATATTCACTG CCGAAGTC
 
Protein sequence
ALVILNSPIR QPPSPLFDAL WKNAAYRVCA DGGANRLHKA TRGKDYVPSL IRGDLDSLDD 
HVRDHYRQLG CVIERESDQN SNDLDKALTA VEREGYKSCC VYGAFGGRFD QEMGCFQALY
KWDSRFDELW LYDDQTCAIL LPADQNHEIY LVHSKEITDP TVPGEGPTCG LIPLSVPCDS
VSTTGLQWNL ENQHTAFGGL VSTSNRVVED KVTVRNSHPL IFTAEV