Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_5423 |
Symbol | |
ID | 7201422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 150912 |
End bp | 151589 |
Gene Length | 678 bp |
Protein Length | 226 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180581 |
Protein GI | 219119652 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCACTCGTGA TTTTGAATTC CCCGATCCGA CAACCACCAA GTCCGCTATT CGACGCCCTG TGGAAGAATG CGGCGTACCG CGTTTGTGCC GATGGCGGGG CGAATCGACT ACACAAGGCA ACGCGAGGAA AGGACTACGT TCCTTCTTTG ATACGAGGGG ATTTGGATTC TTTGGACGAT CACGTACGTG ACCACTATCG GCAGCTTGGT TGTGTCATTG AGCGGGAATC CGATCAGAAC AGCAACGATC TAGACAAGGC CCTGACCGCT GTGGAACGAG AAGGATACAA AAGCTGCTGC GTCTATGGGG CGTTTGGTGG AAGGTTCGAC CAGGAAATGG GATGCTTCCA AGCTTTGTAT AAATGGGACT CTCGCTTTGA CGAACTTTGG TTGTACGATG ACCAAACCTG TGCGATACTC CTACCAGCCG ACCAAAACCA CGAAATATAC CTGGTACATT CCAAAGAAAT CACGGATCCG ACTGTTCCCG GTGAGGGTCC AACTTGCGGA TTAATACCCT TGAGTGTACC CTGCGACTCT GTGTCTACCA CTGGTTTGCA GTGGAATTTG GAAAACCAAC ATACGGCTTT CGGCGGCTTG GTTTCGACCT CCAACCGAGT GGTCGAAGAC AAGGTTACCG TTCGCAACTC CCATCCTCTC ATATTCACTG CCGAAGTC
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Protein sequence | ALVILNSPIR QPPSPLFDAL WKNAAYRVCA DGGANRLHKA TRGKDYVPSL IRGDLDSLDD HVRDHYRQLG CVIERESDQN SNDLDKALTA VEREGYKSCC VYGAFGGRFD QEMGCFQALY KWDSRFDELW LYDDQTCAIL LPADQNHEIY LVHSKEITDP TVPGEGPTCG LIPLSVPCDS VSTTGLQWNL ENQHTAFGGL VSTSNRVVED KVTVRNSHPL IFTAEV
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