Gene PHATRDRAFT_46333 details

Gene Information

• Locus tag: PHATRDRAFT_46333
• Symbol: HSP70B
• ID: 7201514
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011677
• Strand: -
• Start bp: 959314
• End bp: 961495
• Gene Length: 2182 bp
• Protein Length: 681 aa
• GC content: 50%
• Product: protein heat shock protein
• Protein accession: XP_002180736
• Protein GI: 219119972

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000192711
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCACCTTTAC CGTTGCGCTG CCATTACACT GTTCTCCCAC AGCAGTTCTC TAGACATAGA 
CAAACACTGC TTGCTTGTCA TGTCTATTCG GATCTCTCTG CTTGAAAGGG TGAACAAGAA 
TTGACCTTGG TGGACTATGC TGCCACGAGT TGTTGACGGT CCTTCCATCG GCATCGACCT 
CGGAACGACA AATTGTGCTG TCGCGGTCTG GGATTCTACT CGGGGTCATC CGAAATGGAT 
GCGACTAGCT AACATAGCGA CACCGCCACG CAATTCTAGC AAGATAGGTC GCGTTGTTCC 
CTCCGCTGTC CTCTTCCTGA CGCGAGATGC AGCAGCACTA CACAACCTTT TGGACGAGGC 
TCAAGATGTC GACGGGATTC TGGAACGATC TGATCTGGTG GCTCTCGTTG GCAACAGTGC 
AGTGAAAATC CTGGAGAAAT CTCAAGCACG TGAGATTGAA ATGCCTTTCT CACCGGCTCA 
GGTATCGGCC GCTTTCGTGG CCAGTGTCAA GCGATTGATT GGCGCAGCCA ACTCGATAGC 
TTTTCGGAAT AGCGATTTTT TGGACTCGCT CCCCTACCGA GTAGTCTCGG GCGGAACGGA 
AGAAAATAAT CTATATCTCG AGATAACTCC TCTGGGGTCC TCCGAAACAG TCCTCGTGAC 
GCCAACGCAA GTATCAGCCG TTTTGTTACA ATCGCTGCGT TTATCTGCCG GACGGTACCT 
AAGGCTTTGT GCTGCAAAAA AGCAGTTGAA AGTTCCCGGG GATGCTAGAG AGCCTTGCTG 
TCACGCTGTG GTCGGTGTGC CTGCGCAGTA TGGTCGGGCG CAGCGTAGTC TGATAGAGCG 
AGCTTGCCGA ATTGCCGGCT TTACGGGTCG CGTGCTGTTA CTTACAGAAT CAACTGCTGC 
CGCCATTGCC TACGGCTTAA CGGTCGGAAT TACTATTGCA ACAACGAAAA CGATTCTAGT 
ATTCGATATG GGAGGTGGGA CAACCGATAT TACAATTGCT GAAATGCATC CACCAGCTTT 
AGAAGCGCCA ACGTCAGTCA ATGCCGACTT TGAGGTCAAG GTGACGTTCG GAGACCAAAG 
GTTAGGCGGG GATGATATGG ATGCAGCCCT TTCAAGATTG GTATGGCAGC GTCTGAAAGT 
GCATCCGTCA GACTGTAGTT TGCATACACA GCGTGAGGTT TTACTCCACG GCAAGCAAGC 
CAAAGAAGCA TTGTGTGGCA ATGCTGAGCA TGGCGATCTG CAACCAGTCA ATTCATACTC 
AATGACTGTT CATGGCCGGT CAATATGTTT GACGCGAAAG GATTTCGAGG CTGTGATTGA 
GCCGCTAATA CATCGAGCAA AGAAGTTGAT CCAAGAGGCG ATACGGCAGT ATAAAGCTAC 
TTCTTGCACT TCGATTATGA CTGATCAAAC CGACGCTGCT ATAACATTCG ACGAAGTTCT 
TCTCGTCGGT GGAGCCACCC GTGTTCCGGC AGTACGGTCA CTGCTCAAAC AACTTTTCCC 
TCCGCCGGTC CCTCCCGAAT TGTGTTTGTC TTTGAATGCC ATGGCTGCAG TGGCACAAGG 
AACGGCTATT CAAGCCGCTT TGTGGTCCGG TTTGATACCA AGATACGACA TTGAATCTGC 
TCTAATGCTG GATACCGTAC CACACGCAAT AGGAGTGCGT TTGAGTGAAG CACACTTCAT 
TGAGGTCATT AAGAAAGGAT CACCTTTGCC AGCGACCGGA TTTGCTCCGT TTCAGTTAGC 
TGATGCTCGA CAAGCGGGCG TTACAGTACA GGCCGTGGAG CAAGTCGACA TCGAAACCTA 
TGAAAGCATT GGAGACTTCA CCTTTTTGCT GCATCGGATG ACGAAGGCAC AGCTGGCAAA 
CTTGGGGAAC GACGCACGAT TGGTAGATGT GGGCATGAAA CTGAACGCGC AAGGAGAGTT 
TGTTGTTTCA ATTTTGGACC CTCACGATCC CGAGCACGTT AAGAGACGTT TAAATCATGA 
AAAAATACGT GCGGCATCTG CCGATGGATC AAAAGCGGGC CATAGTGTTT TGAATACCTA 
CACCGCAACT GCAGAGGTTT GTGAAGGTGA AGCGTTATTG ACGGATCAAC TCGTGTTGTG 
CTTTGTCTGT ATACTATTGT TTGTGGTCTA CGTTATGGTC AAACTTTTAG TTGCCGAACC 
AATTTCTGTC CTGCAGCCAT GA 

 

Protein sequence

MLPRVVDGPS IGIDLGTTNC AVAVWDSTRG HPKWMRLANI ATPPRNSSKI GRVVPSAVLF 
LTRDAAALHN LLDEAQDVDG ILERSDLVAL VGNSAVKILE KSQAREIEMP FSPAQVSAAF 
VASVKRLIGA ANSIAFRNSD FLDSLPYRVV SGGTEENNLY LEITPLGSSE TVLVTPTQVS 
AVLLQSLRLS AGRYLRLCAA KKQLKVPGDA REPCCHAVVG VPAQYGRAQR SLIERACRIA 
GFTGRVLLLT ESTAAAIAYG LTVGITIATT KTILVFDMGG GTTDITIAEM HPPALEAPTS 
VNADFEVKVT FGDQRLGGDD MDAALSRLVW QRLKVHPSDC SLHTQREVLL HGKQAKEALC 
GNAEHGDLQP VNSYSMTVHG RSICLTRKDF EAVIEPLIHR AKKLIQEAIR QYKATSCTSI 
MTDQTDAAIT FDEVLLVGGA TRVPAVRSLL KQLFPPPVPP ELCLSLNAMA AVAQGTAIQA 
ALWSGLIPRY DIESALMLDT VPHAIGVRLS EAHFIEVIKK GSPLPATGFA PFQLADARQA 
GVTVQAVEQV DIETYESIGD FTFLLHRMTK AQLANLGNDA RLVDVGMKLN AQGEFVVSIL 
DPHDPEHVKR RLNHEKIRAA SADGSKAGHS VLNTYTATAE VCEGEALLTD QLVLCFVCIL 
LFVVYVMVKL LVAEPISVLQ P