Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46207 |
Symbol | Pt-KIF3 |
ID | 7201280 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | + |
Start bp | 618341 |
End bp | 621351 |
Gene Length | 3011 bp |
Protein Length | 953 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | kinesin family-like protein |
Protein accession | XP_002180470 |
Protein GI | 219119418 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTAGGAG AGTGCTCTGC TGGTCTCCGC TTTCACAATC CGCACACTAT CAGTTCCTTA CCGCCATTCC AAGGGCGATT GTCGAAGCTT TTCCGACTGA AGAACCGACC AAGCAAGCTC TTACCCAAGA TGTCTTCCAG ACTAGCTCTT GTGACGAATG ATGACGATGC GCCAGTCAAC TCCTTTGCCG ATACGAGTCG ATCCGGGAAC GTTCATGTAA TTGCTCGAAT TCGTCCTTTC CATCAAATCG AAATTGACAA CGGATGTCAG ACGAGCGTCT TCGCGGTAGG GAAGCCTACA GAATTAAACG CCAAAGCAGA GAGGGCCGCT CGCTTGGGGA TTACTGAGAA AGATGCCAAC GCGCCGCTTT CTCTTGGTGG TGCGTCCTCC ATCGATAGTG ACGATTTGCT TCTGGACGAG CTTCTCGATG AAAATTGTAC TTACACCGAA AATTCCGCAC ACACGTCATC AATGGAAGAA AGCATCACAA ACGAACCAAT TGACACCGAT GTTAAACAGC CAGCTGAAGT TGCTTCTAAG TTCCTCATTG TTCGACAGTC AAAAAACAGA AAACTTACTG AAACTTTGTT CGAGTTCGAT GCCGTGCTTG CGCCTGACGC GACTCAAGTT GATGTCTACA ATTCCGTTAA AGGTCCGGTT CAGAACATTT TGCGTGGATG CAAAACGACT GTTGTTGCAT GTGGTCAAGC TGCAACTGGA AAATCGTACA CAGTGATTGG ACCAGCAGGT AGCAAGAGCC AAGAAGACTC AGCCAAGCTT ACGGAACACG ACGGTTTAAT TCTGAGAACC GTGCACGATT TGTACGATGC TAAGCAAACT TTCGCGAAGA ATGGGAAAGA TTTAGCCATC GAGCTTACAT ATATTGAGAT TCACAATGAC AAAATCCGAG ATTTACTGGC TGATAACAAT CATGCTATGC GCCTTATGGA TCAGGGATCT GATTCTGGCG TGCATGTAAA AGGCATTGAG GTTGCTACCG TGGAATCAAT TCCCCAAATT CATGCGCTAC TCTACGATGC GGCGCTGCGA CGCAAAACAG CTCCATTAAA ACAAAATCGA CACTCAAGTC GGTCACATGC TATATGCACG GTGACGACGA TGGTCAAGCC ATTGGATAAT TCATCACAAG CGTGTGTTGG AAAGTTGACA TTAGTTGATT TACCAAGCTC TGAGAGAATC AAGGAAACTG GTGTAAAGGG AGAAAGGCGC CAGGAAGCCA TCCAAAACAA TAAAGACCTG TTTACGTTGG GAAAGGTAGT GCTGTCTCTA TCGGAAAAGA GTAAACACAG ATTCCATTGG ACCCAAAAGC ATGTTCCGTT TCGAGACTCC AAGCTTACTA GACTATTACG AGATTCGTTG GGAGGTAAGT GTAACTTTCA CAGGCTATCT GCGCCGTTCA TGTGAATGGC TCTTACCTCA ACTGAATTCA TTAGGTAACT GTTGCACACT GTTGCTGGCA TGCGTCTCCC CGGCTGACAT TCACGCGGCC GATTCGCTGA AGACATTGCA ATATGCGGAA CGCGTCACAG CCATTCGTTC TGCTTCAGAG CTCAATGACA AGCAGCCAGA GTCGGAAGAT AATACGAGTT CTTCTTTTGA TGTACGTACT TACAGGTATG GAAGTTTTGA GGTCGCACGC TGCGCTCAAA GAATGACTCA CAAGTAAGCT TGCTCTGCAG GTTCAATCCG TTACACCACT TTCTGTGGGA TCCTTCGTGG ATTCACAGGT TCCTGATGAC GTCCAGATGC TGAGCGCTAA ACTTGACATG TGCAATGACA TGTTAGAGAA GCTGGAGGCC AAAAGTTTTG ATCGAGAGTC TCGACTCCGT GCTTCCAATG AGAATGTCTG CAGAATCGAT CAACTATATG GTGAACTAGA TGGGCTTTTC GCAAAAGTCG ATGCTTGCAA CGAGAAGCTT TGGAAGCTGG AGACCCATAC ATTCGAAGAA GAGACTAGCA TAGGAATAGA CTCAGCGGGA TCATTCGAAG ATATAAGACC AGCAAACATG CTTCTTCTCA GTCACGAAGT TGATGACCTT TTGTTAAGGC TGAACTCATG TAGCGAGCAG CTTCGTCATT TGGATTTATG CTCGTGCAGC ATCACAGTGA TGGATAAAGT CGTTGATATC GGGCAAGCTA CTTCCGCCAA TACATCTTGC AAAATCATTG CTGAGTTGGA TGGGTCGGAC CACACCCTTA CGGACTTGGC GACATTTGAA GTTTTTGATG CGCTTGAGTC AAATTTTATA ACCGAAGAGC GCAATGATGA TCATGAATTT GTGTCATCCA ACGTTGCTCC TGAAAAAGAT AGCTTAATGA CGGGGATACC TGGTCTCGAA AAGGAACACA CAACTTTCTC CGATACCGAA GATGAAGTGC AAGTGAACGA CACTAACCAA AAATTTGAGC AAACGGTACG AGTCGTCCTT TCAGAAAAAA AAGACGGGGT CTCACCAGAA TTGCATCATA TTCAACAGGC CCAAAAAGCT AGCGAGTGTC ACTGCGAATT CTCTGTCTTT GCAACGAATC CCGAACACGC CGAATTTTAT CTTCCGAAGT TGGCAATCTC TTGCGAATGT GGCAAGGAGC AATCAGTATC ACTTGTTACT GGCACGGAAC CGAGCGCTCT CGAGAACATC CTACGTAGTT GGCAGGTTAT GTTCCTTCAC TCTTTGTCTA TTTCTGATGC CGTGTCTTTT GTTTATTCAT ATAAGCACCA AGCTGCAGAG ATGGCGAAAG AACTTTTCCA TTGGCGAACA ACAAGAAATA TGACATCCTT TCGGCCAAGT CTCTGCGCAG TTGCTTTGCA TGTCTGGAAC CGAACCTGTC AAACCGTCAT CAAATCGATT TTCGAACAAC AGGCCACTGG GATCAAGAAG CTCGATCGAC CGGACTTGTT GCAGGTAAGG CTGGCAACGG CAACCCGTAA AGTCCTAATG GAGCAGCGCT ACCAGAAGAT TGAATGCATT GAAATTAGTG GTCTGTCTTG A
|
Protein sequence | MVGECSAGLR FHNPHTISSL PPFQGRLSKL FRLKNRPSKL LPKMSSRLAL VTNDDDAPVN SFADTSRSGN VHVIARIRPF HQIEIDNGCQ TSVFAVGKPT ELNAKAERAA RLGITEKDAN APLSLGGASS IDSDDLLLDE LLDENCTYTE NSAHTSSMEE SITNEPIDTD VKQPAEVASK FLIVRQSKNR KLTETLFEFD AVLAPDATQV DVYNSVKGPV QNILRGCKTT VVACGQAATG KSYTVIGPAG SKSQEDSAKL TEHDGLILRT VHDLYDAKQT FAKNGKDLAI ELTYIEIHND KIRDLLADNN HAMRLMDQGS DSGVHVKGIE VATVESIPQI HALLYDAALR RKTAPLKQNR HSSRSHAICT VTTMVKPLDN SSQACVGKLT LVDLPSSERI KETGVKGERR QEAIQNNKDL FTLGKVVLSL SEKSKHRFHW TQKHVPFRDS KLTRLLRDSL GGNCCTLLLA CVSPADIHAA DSLKTLQYAE RVTAIRSASE LNDKQPESED NTSSSFDVQS VTPLSVGSFV DSQVPDDVQM LSAKLDMCND MLEKLEAKSF DRESRLRASN ENVCRIDQLY GELDGLFAKV DACNEKLWKL ETHTFEEETS IGIDSAGSFE DIRPANMLLL SHEVDDLLLR LNSCSEQLRH LDLCSCSITV MDKVVDIGQA TSANTSCKII AELDGSDHTL TDLATFEVFD ALESNFITEE RNDDHEFVSS NVAPEKDSLM TGIPGLEKEH TTFSDTEDEV QVNDTNQKFE QTVRVVLSEK KDGVSPELHH IQQAQKASEC HCEFSVFATN PEHAEFYLPK LAISCECGKE QSVSLVTGTE PSALENILRS WQVMFLHSLS ISDAVSFVYS YKHQAAEMAK ELFHWRTTRN MTSFRPSLCA VALHVWNRTC QTVIKSIFEQ QATGIKKLDR PDLLQVRLAT ATRKVLMEQR YQKIECIEIS GLS
|
| |