Gene PHATRDRAFT_46090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46090 
Symbol 
ID7201333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp246718 
End bp247714 
Gene Length997 bp 
Protein Length282 aa 
Translation table 
GC content59% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180600 
Protein GI219119691 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGGCGAAGAC CAGGGTTCCA AAACGGAACC GGAGCCAACC TTGCACGACG CTGGCCACAG 
CATCCATCGA CACCGGACCC AAAAGAACCA CACACCGGGG GTTGACGACG TACGTGTTGC
TCGTGGGTAT TGCTCGTGGT GAGGGATCAT GACGGGCACA TGGCATCACC CTTATCGCGG
TGTCGGAATC CTTGTGTGGT TGGTCTTGGC CGTGGTCTTG ATCGTTCCCG GCCTGGTCGC
GGCTTGGATT CGACCGACTA TCGCGTCGTC CACGAGAACG GTTCCTCGTA CATTCCGACT
CGCCCCAACT CCCTCCACCA GTCGTACTCT ACGACGGGCG ACGCACCATG AGCACAATCC
GGATGCGGAC CGGACCATTT GGGACGACAA CAACAACAGC AACAACGCAC CAGATTCTAT
TCCGATTCGC GAGTGTCGGC ATGCCGAATT GGGATCGGTG GCGGACATTA TTCTGAGTAG
TTTCTACGCC AACACCACTG GTCCATGGAA GCAGCTCTAC CGATTGGGAG AACTCAATCG
CGTCCAGCAG GGGTTTCCCT ACGGCGACGA CCGGGCCCGG CACCGCATGC TCGTGGCACT
CGCACCGACC AACGGAGACC TGGTCGGCTT TTGCGACGTG GACGCCCGGA CGCCCAATCG
ACCCACCTCC TACACCTATA ATCCGCGGCC GTATCTTTCG GATTTGTGCA TTCATCCGGA
TTGGCGCCGC CGGGGGATTG CCCGGGCCTT GGTGCGAGCC TGTGAACAAT TCTGTGTCGA
CCAACTCGGG AGTCACGAAA TCTTTATTCG TGTGGAACGC AGCAACACTC CCGCCGTTGC
CATGTACCAG AGCTTGGCGT ATCGGGAAAT AGACAATCCG GATGATCCCG ACGGTTGCAT
TATGCTCTTG CGGAAAGAGT TGGGTACCGA CGAGGCCACG AGCAACACGA CCATGACGGT
GACTGGGACG GTCGGTACCC ACACCCGACC CCGCTAA
 
Protein sequence
MTGTWHHPYR GVGILVWLVL AVVLIVPGLV AAWIRPTIAS STRTVPRTFR LAPTPSTSRT 
LRRATHHEHN PDADRTIWDD NNNSNNAPDS IPIRECRHAE LGSVADIILS SFYANTTGPW
KQLYRLGELN RVQQGFPYGD DRARHRMLVA LAPTNGDLVG FCDVDARTPN RPTSYTYNPR
PYLSDLCIHP DWRRRGIARA LVRACEQFCV DQLGSHEIFI RVERSNTPAV AMYQSLAYRE
IDNPDDPDGC IMLLRKELGT DEATSNTTMT VTGTVGTHTR PR