| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46077 |
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| Symbol | |
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| ID | 7201425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011677 |
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| Strand | - |
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| Start bp | 170109 |
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| End bp | 171667 |
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| Gene Length | 1559 bp |
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| Protein Length | 343 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180587 |
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| Protein GI | 219119664 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00656632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACGTGTGCA GAATTCGCGG AGCAACTTTC TATTGACAAC GGTCGGTCCC GGTAACGTGC
CCTTACTGGT AACAGCCGAT CATTTCGTTC CGGTTTGATC ATTGTCGTGG CCAGGAAAGT
AAGCACGACT TGATGTGTGT ATTTCTGACA ATTTTTCTGG ATAAATCAAT CCAATCAAAC
GTATTCTTGG TGCGTCGTGC GACTGTGCTC ACGGTTACAG ATCTAGTCAT TTTCAGTTCG
ACAAGCCGAG AATCACGTCT CGAACGGTCA CTTCCTGTTG TTCCGCCGCA CCACTCTAGA
GCCCTCCGTA CGTACGACTC CTGGAAAGTG TAAGAGAGTA ACCTTACCCG ACTCTTTTAC
TGTTTGTTGA GCTGTGTCTC GTATCAAGAA TCGCTCGGTT TCTAGGCTCG CCATTCTCGC
GGCGCGCTTT ACGTTCCGGC CAACCGCTTG AGAGCAGCCG TAGACCAACA ATCGCCTTGG
GATCCTTCGC CCACAATCGA ACTACGATAC CGTCTGTCCA ACGAACCATG GATTTGTTTT
TGTTCACAGT CTCCGCAGCA GCCTATCGTT ACCACATTGG CTGGAATAAA ACGAAGTTTT
TCCGAGGGAT TTCTTACGCA ACGTTGTCGA AACAAAATGC CGAAACGAGT ACCGCGATAC
TTCGGCACTT TGCCAAATCG AGTGTCTTTG GACGCTTGGC CTCGTACGAA GGAGCTTTGA
CGGTCCAACG GGACGTGGAA GACGGCGAAA AGCTAGAGAT AGGTATTGAA TTTGCCAAGA
AAAAAGGGGT CATCGATCCG GACTTTACAC CCGAACCCTA TATAACCATT GACGTTTTGG
GCAAAGCACC CGCGGAGGTC GCTTCCATCA TTCTCCAGCA CGTTGGACAA CAAGCGTCGG
GCGTGATTGT ATTGGTCGGC CTCTCTGGAA CGGGAAAAGG CACCACCGTC GCGCTCTTGC
GTCAAACACT AGAACAGGAC CAGGGCAAAC AGGTCGTCAC CTGGTCCAAC GGCAACGTAT
TTCGTTCCGT CACACTCTTG GCGGCGACCT GGTGCGAGCA ACAACCCGGT ATTGACGGAT
TCGATGCCAC AAAGGCTCTG ACCAAAGGAA ACATTGCCAA TTACATGAAA ATGCTGACCT
TTGGTAAATT CAACGGAAAG TACGATATCC GCATTCACGG TTTGGGTCTC GATGTGCTCG
TATCGGAAGT GCAAAACACG ACGCTCAAAA GTTTGGCCGT CTCCAAGAAC ATTCCCACCG
TTGCTCAATT CACACAAGGG GAAGTTATTT TGTTCGCCGC CCAAGCTGTG GAAACAATGG
GTAAGGACGG GATCTTTGTG CTTCTGGAAG GTCGCGAACA AACGGTTGAT TACGTACGCA
GTCCGCACCG TTTCAACCTT ACTCTATCCG ATCCAACCTT AATTGGCAAG CGACGAGCCG
CGCAGCGGCT CATGGGATCG GCCGTGGGAT CCGTGCCTAA AAATGCAGCC CCAGTCATCA
TTCAACAAGC CATGGAAGAT GCCCTCCACG ATATGGTGAA GGAAATTGAA TCGCAGTAA
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| Protein sequence | MDLFLFTVSA AAYRYHIGWN KTKFFRGISY ATLSKQNAET STAILRHFAK SSVFGRLASY
EGALTVQRDV EDGEKLEIGI EFAKKKGVID PDFTPEPYIT IDVLGKAPAE VASIILQHVG
QQASGVIVLV GLSGTGKGTT VALLRQTLEQ DQGKQVVTWS NGNVFRSVTL LAATWCEQQP
GIDGFDATKA LTKGNIANYM KMLTFGKFNG KYDIRIHGLG LDVLVSEVQN TTLKSLAVSK
NIPTVAQFTQ GEVILFAAQA VETMGKDGIF VLLEGREQTV DYVRSPHRFN LTLSDPTLIG
KRRAAQRLMG SAVGSVPKNA APVIIQQAME DALHDMVKEI ESQ
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