| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46056 |
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| Symbol | |
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| ID | 7201305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011677 |
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| Strand | - |
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| Start bp | 108058 |
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| End bp | 110635 |
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| Gene Length | 2578 bp |
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| Protein Length | 612 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180572 |
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| Protein GI | 219119633 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.268711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTATTCCACC ATGGTAGGTA GGGACCGGCC CGACCTGTCC TGTCCACTCC TTCCGCTATC
TGGTTTGCTT TCCGGAAAGC ACAGAGCAAC ATGGTTGGCA AGTCGGCAAT GACAATGGAG
GCTGTTGCCG TTTTGCTTTT CGTGGCTTGT GCCCGCTTGG TGAGCGCACT TTTGCCCACG
ACGACGACGC GTCGCAAAGA CCTTTCGAGC AGGCTCGTTT ATTCCGGAGC GTCTCCGTCT
CCAGACCGCG GTGCATCCCC GTACTTTCCT CAAATAACGG CCCGTTGCTT TGGAACGTTT
CCAAGATTAC TGCAGAGCCC AGACACACAA AGACTACCGA GACGAGTCGT TTCGACAACC
TTGTCGGCGA GTCGCACGAC CAATCATCCA CCGTCGAAGG CGTCCGTCGC CTCCAATCGC
TCCTCACGAG AGGAGCATCT CGGATTGTTT CTGCAACATA CGCAAGAATC GCTGCGGAAC
GGCTCCTTTG TCTCGTTGAC GCTTCACGGA CCATCCAAGA AAGTCCTGCA GCAACAGGTG
ACCGACGAAA CCAGAGGAGC GATTCGTTTG GTAGCGGGGC GACTCGTTCA AGTCAAACAC
GCCACTAAGC TACAAGTTAC TATCAAATAC CATCTAGCGA CGGATATTGT CAAAAACTGG
GACTTGGACG TAGCTGGTGA GTGGATGGAG GCTCTCTTTA CCGCTTGGGC GATGCCACGA
AATGGTGAAC ACGATCGCAC ACGTTCGGAA CGGAACCGTT TCGTCGCGGA AGCGGCATCG
GAATGGGGGG ACGAAGTCCT CTATGCTGCG CCGGGAACAC CCCTGGCTAT CCAGAGGGGA
ACTTTGGAAA CGGTGACCAC CATTTGGGAC CTGCAGGTGC AACACAAACT CAAAAAGCCT
CGTCTCGTTT CGAAGCCGAC ACCGGAGCGC AACGGCATCG ATGGCCCGTC GCAGACATCC
TTCGTGCCTC TGGCGCACGA TCGTGTCAAG CAAGGACCCG TCCCTACCAA AGCCGCATTC
TTGCAAGCAC TGGGCGTCAC TAACGAACAC GGCAAACCAC GGGCTGGAAT GGCCTCGAAA
CTACGTCAAT GTCAAAAGTT TGTCGAAATT GTCCACCAGC ACATTCGACA GGCCTTACCA
ACCACGGATA CCCAATCATC CATCGACGTT GTTGACATGG GATGCGGTCG CGGCTACTTG
ACCTTTGCAC TCCACCACTT CCTTCGACAA CAATATCAGA CCGCCAATGT TCAGAGTCGA
GGTATTGATG TCCGACCGAA ACTTGTGGAC GAAATCAACG GTATTGCGCA AGCACTTGGT
AAAGACATGG AGGGTCTAGT GTTTGAACAG GGTACCATTG AAAGCCATTT GGCTAAAGCT
AGGGCGCAAA GGCTTGCTAA GCCGGACACA AACGATTCGC TGCGGGTTTC GATTGCGCTA
CATGCCTGCG ATACGGCAAC GGACGATGCG CTCTGGTCTG GAATTATGGG TGATTCCCAT
GTAATTGTGG TAGCACCGTG TTGTCACCGA CAAGTGCGAC CCCAGCTCAA TCAACACGCC
AACCAAAATC CATCCCATGC ACTAGGGGAT GTGCTGCGAC ACAACATTTA TCGTGAGCGA
ATGGCGGAAA CGGTGACGGA CTCGATTCGA GCACTTCTCA TGGAGTTGGC CGGGTATCAA
GTTCAAGTTT TTGAATTTAT CGGTGGTGAG CATACCAGCA AGAACGTGAT GCTAACAGGT
GTTAAAAGGC TTGACAGGTA TCCGACAAAC GGAGACGCGG AGGACCTACG CCGGCGACTG
CGAGAGCTGG CTTCCTTATA TGGAATTCAC AAACACACGT TAGCTTCATT TATGGGGGAG
AGTTTGCTAC TGGATGATGC CTCACAGGCA TCATTACCGC TCTCCAAAAA TCGCATGCCA
CCTTTGTAGC AGACATCTTT CGTACATGGC GTCCGTTTTT GCATTGTAAA TATAGTTAAG
AGCGCGTATT CCGAAGTGAG CTTTTTCCTA GGCTTGACGT ATGTTCATAT TCCAAGCTCT
AGTGTCGCGC AAATATCAAC GGCTCGCACT TTGTAGCAAG CGATCTCAGC CGGCAACGTC
CAACGCTAGT CGAAGTGTAT CTTCCGACCA TCCGTATTCT CTGGCATTAT CCAAAAGCGC
TTGCCGTTTC TCGAGTCGGT CTATCACTGG TATGAGGGAG TCGTGCAAAG AATCGTCGAG
CTCGATAGCG CGCTCGTAGT ACTGTGTACT TTCCTTTAAT TTCCAAAGCT CCGAAAGAAT
TTCACCAGCG CGAAGCCATG CTGTCGCATA GTTGGGCAAG AGCTCGGTGC CTCGCAACGA
ATCCTGAGCA GCCTTGAGCA GAGACCACTG ATACAAGCCG TGCCGATATT GGGTGCGACG
AAATTGTTCC TCCTGGCGAC TGCTTTCTTC CACGACACGT CTGAAAATGG AGTTTGCCAA
CGAAGTATCG ATTGACGCTT CTTCGTACAG AGTTTGCAGT TTGGGTGTAT CTGGAACCAT
CAGAATCAAA TCGTCCACGA TTTCTTTCAG TTGTTCTTTG TGAGACGCCG CACTTTTC
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| Protein sequence | MVGKSAMTME AVAVLLFVAC ARLVSALLPT TTTRRKDLSS RLVYSGASPS PDRGASPYFP
QITARCFGTF PRLLQSPDTQ RLPRRVVSTT LSASRTTNHP PSKASVASNR SSREEHLGLF
LQHTQESLRN GSFVSLTLHG PSKKVLQQQV TDETRGAIRL VAGRLVQVKH ATKLQVTIKY
HLATDIVKNW DLDVAGEWME ALFTAWAMPR NGEHDRTRSE RNRFVAEAAS EWGDEVLYAA
PGTPLAIQRG TLETVTTIWD LQVQHKLKKP RLVSKPTPER NGIDGPSQTS FVPLAHDRVK
QGPVPTKAAF LQALGVTNEH GKPRAGMASK LRQCQKFVEI VHQHIRQALP TTDTQSSIDV
VDMGCGRGYL TFALHHFLRQ QYQTANVQSR GIDVRPKLVD EINGIAQALG KDMEGLVFEQ
GTIESHLAKA RAQRLAKPDT NDSLRVSIAL HACDTATDDA LWSGIMGDSH VIVVAPCCHR
QVRPQLNQHA NQNPSHALGD VLRHNIYRER MAETVTDSIR ALLMELAGYQ VQVFEFIGGE
HTSKNVMLTG VKRLDRYPTN GDAEDLRRRL RELASLYGIH KHTLASFMGE SLLLDDASQA
SLPLSKNRMP PL
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