Gene PHATRDRAFT_27709 details

Gene Information

• Locus tag: PHATRDRAFT_27709
• ID: 7201180
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011677
• Strand: +
• Start bp: 624416
• End bp: 626469
• Gene Length: 2054 bp
• Protein Length: 640 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002180471
• Protein GI: 219119420

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.909738
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGGAGCAGCC AACGACCCAC CATCCTTTTC AAAGGAGGTA CGAATCATTG GGACATTGTA 
GCTTGGCTCT TTGCGAAACC ATGCCTACGC TCTCGGTCGA AAAGGACTTG CTCTTTCGTC 
ATTTAGGCCG TACTTACACT GACAAGGAAT TTGACGAGCT GTGTTTCGAG TTCGGAGTCG 
AGCTAGACGA AGTCACGTCG GAAGTGGAAG AAGCCCAGAA GAGCGCCACC GTAAAGCTTT 
CCAAGTCACA ACTTGAATCT CTCAGCGCCG CAATTGTGTA CAAGATTGAT GTCCCGGCGA 
ATCGATACGA TCTTTTGTGT GTCGAAGGAC TCAGCCGAGC CTTGCAAATC TTCTTGGGCG 
ACGTCGACGC TCCGGAATAT CGACGTTTGG ACGGAGTATC CGATGCGGCA CAGCGCGTTA 
CTATGACAGT CCACAAAGCC CACACGGACC AGATTCGTCC CTTTGTTGTG TGCGCGATTC 
TGCGGAACGT GACCTTCGAC GAGGAACGAT ACGCGTCTTT TATTGATTTA CAGGATCAGC 
TACACCGCAA TCTATGTCGT CAACGCACAC TTGTTGCAAT CGGGACGCAC GACATGGACG 
TGGTACAAGG ACCCTTCTTT TACGACGCCC GCGCGCCGAC AGATATCTCT TTTGTCCCGC 
TCACCCCGAA TGATAAGAGC TACGTAGCCA ACGAGCTGTT GGAATTCTAC GAAACCGAGC 
CTGCTGCCAA ACACCTCAAG CCTTACGTAC CCATCATCAA GGACAGTCCG CTGTATCCGG 
TGATTGTGGA TAGTAACGAG ACAGTACTTA GTCTACCGCC CATCATAAAC GGTTCGAAGT 
CCAAAATCAC ACTCGATACC AAGAATGTCT TTATCGAATG TACCGCAACC GATCTGACTA 
AGGCTAACAT CGTACTCGAT ACGATGGTCA CTATGTTTTC GGGCTACTGC GAAGTACCTT 
TTACGGTGGA GCCCGTTCTG GTACAGTATC AAGAAAATGA CAAAATTGTC AGTTCGTATG 
TGACACCCGT CTTAAGTTCA CGTCAAGAAA CAGCCAAGGT AGACTTTTGC AATTCGCTCA 
TCGGCATTCA AATCACCCCG CAAGAGATGC AAGCTTTATG TAACAAGGTG CAATTAGGCC 
CCGCACAGCT ACTGGAAAAC GACACGGTTC TACAAGTTAC CGTTCCGCCC ACTCGCTCGG 
ATATTTTGCA TCCTGTTGAT ATTGCGGAAG ATATTGGAAT CGCCTATGGT TACAACAATA 
TCCGCCGGCG AGTGCCAACG ACCAACACGG TGGGAGGTGA ATTTCCACTC AATCAGACGG 
GAGATCTTTT GCGGGAAGAA ATAGGGCGCG CGGGGTATGT AGAAGTTTTA ACACACGGAT 
TGTGCAGCGT GCGTGACAAC TTTACCGCCC TGCAGCGTCC TGTTACGGCC GCCGTCAAGC 
TCTCCAATCC GGCCAATGTA GAATACCAAG TTGTCCGCAC AACGCTGCTG CCGGGCTTGC 
TGAAAACGTT ACAGCACAAT AAGTCTGCAT CCTTTACGGG GGGTTTCAAG TTGTTTGAAA 
TTTCCGACGT TGTTTTACCG GACAGCGAGA ATGTTATGAC GGAAACAATC GTCGGGGCCA 
AGAACTCCCG ACGACTAGCT GCTGTTTATG CCGGGCCAAC GTCTGGCTTT GAAATCATCC 
ATGGTTTAGT CGATCGGGTC ATGACGCTTT TGGAAATTGC GCCCGAAGAG GCGTACATTG 
CCAATTCTGC CAAATCGGAC GAAGAAGAAT ACCGGGTAGC TCGAGAAGGC TGGACGTATA 
CGATTGCGTC CTTATCGGAA AGCGACCCGC ACGTGAACAC CTACTTTCCT GGGCGGGCTG 
CGGCTATTTT GCTCACAAAA CCCAACGCGA CAAGTAGTTG TGTGGTGGGA ACTTTTGGAA 
TTCTGCACCC CGACGTCCTG GCCAACTTTG ACATTTTGTA TCCGTCCAGC TGTGTGGAGT 
TGGATCTGGA AGCGTTGATG TAGCGCAAAT AGACAGGATG GCAAATACTT TATTAATGCA 
AACACACAGA TTAT 

 

Protein sequence

MPTLSVEKDL LFRHLGRTYT DKEFDELCFE FGVELDEVTS EVEEAQKSAT VKLSKSQLES 
LSAAIVYKID VPANRYDLLC VEGLSRALQI FLGDVDAPEY RRLDGVSDAA QRVTMTVHKA 
HTDQIRPFVV CAILRNVTFD EERYASFIDL QDQLHRNLCR QRTLVAIGTH DMDVVQGPFF 
YDARAPTDIS FVPLTPNDKS YVANELLEFY ETEPAAKHLK PYVPIIKDSP LYPVIVDSNE 
TVLSLPPIIN GSKSKITLDT KNVFIECTAT DLTKANIVLD TMVTMFSGYC EVPFTVEPVL 
VQYQENDKIV SSYVTPVLSS RQETAKVDFC NSLIGIQITP QEMQALCNKV QLGPAQLLEN 
DTVLQVTVPP TRSDILHPVD IAEDIGIAYG YNNIRRRVPT TNTVGGEFPL NQTGDLLREE 
IGRAGYVEVL THGLCSVRDN FTALQRPVTA AVKLSNPANV EYQVVRTTLL PGLLKTLQHN 
KSASFTGGFK LFEISDVVLP DSENVMTETI VGAKNSRRLA AVYAGPTSGF EIIHGLVDRV 
MTLLEIAPEE AYIANSAKSD EEEYRVAREG WTYTIASLSE SDPHVNTYFP GRAAAILLTK 
PNATSSCVVG TFGILHPDVL ANFDILYPSS CVELDLEALM