Gene PHATRDRAFT_20677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_20677 
Symbol 
ID7201486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp818657 
End bp819486 
Gene Length830 bp 
Protein Length236 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180521 
Protein GI219119525 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.732911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCTGTTTACT TTTACTTCGA CCAAAGAAGT GCACATCTGA CTTTCACCTA CTACGAGAAT 
GGCTCAACGT GTTGCTGCAA TTGTTGGGGC GGGTCCAGGA AATGGAGCTG CTTTTGCCCG
AAAATTTCTA GACGAAGGGT TTAAAGTTGC CGTATTGTCC CGCAGTATCG ACTCAATGAC
CAAGCTGGCC GCAGACTTAG GAAATACAGA ACAAGTGAAA GGCTATGCGT GTGACGTCAC
CTCTGACAAT AGCGTCAACG CCGCCTTTGA GCTTATCCAG AAAGAGTTTG GACCAGTCTC
AACGGTTGTC TATAATGCGG GATCTGGAGG GTTTAAGCCT TGGGAACAAT GGACCGCTGC
AGAAGTTACC ATGGCGGCTG ATACAAATGC ATCTGGTCTG TACCGTGCTG CCCAAGCAGC
CTTTCCCCAA TTGGAATCCA ATGGCGGGGG GAATCTTTGT GTGATAGGTG CTGGTGCTGC
CACTCGCGGA CGCCCTATGA CGGTCGGTTT TGCCGCCGGA AAAGCAGCGC AGCGCTCAGT
TGCTCAGTCG CTAGCCCGTG CTTGGGGTCC CAAGAAAATT CATGTGTCCT ATTTGGTGAT
AGATGGTGTC ATTGACGGTG ACAGGGCTCG ATCATTGGTC GGCGACAAGC CCGACGAATT
CTTTTTGAAA AGTGAAGACA TTGCCAATGT CATTTGGAAT ATTTGTGAAC AGAAGCCATC
GGCCTGGACA TTTGAACTTG ACGTGCGTCC CTTCGCTGAG GAATGGTAGG TCCGTACACA
GGTGTCGTAC ATATTCCCCT GGTGTAAATC GAGATGATAT CTGTATCTTT
 
Protein sequence
MAQRVAAIVG AGPGNGAAFA RKFLDEGFKV AVLSRSIDSM TKLAADLGNT EQVKGYACDV 
TSDNSVNAAF ELIQKEFGPV STVVYNAGSG GFKPWEQWTA AEVTMAADTN ASGLYRAAQA
AFPQLESNGG GNLCVIGAGA ATRGRPMTVG FAAGKAAQRS VAQSLARAWG PKKIHVSYLV
IDGVIDGDRA RSLVGDKPDE FFLKSEDIAN VIWNICEQKP SAWTFELDVR PFAEEW