Gene PHATRDRAFT_20508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_20508 
SymbolELO6b_2 
ID7201238 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp391738 
End bp392876 
Gene Length1139 bp 
Protein Length278 aa 
Translation table 
GC content46% 
IMG OID 
Productelongase delta 6 elongase 
Protein accessionXP_002180428 
Protein GI219119330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0418317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGTCTTTTGT GGTAGCTATC GTCATCACAC GCAGGTCGTT GCTCACTATC GTGATCCGTA 
TATTGACCGT GCACTTGTGT AAAACAGAGA TATTTCAAGA GTATGATGGT ACCTTCAAGT
TATGACGAGT ATGTCGTCAT GGTCAACGAT CTTGGCGACT CTATTCTGAG CTGGGCCGAC
CCTGATCACT ATCGTGGACA TACCGAGGTA AGCGCAAATG TCCCATTATT TGGTGGTTTC
GTTTGTCGTA TCCCTACCTG ATCTCACCAC CATGTGCTCC GTTTTCATGA TCAGGGATGG
GAGTTCACTG ACTTTTCTAC TGCTTTTAGC ATTGCCGTGG CGTACCTCCT CTTTGTCTTT
GTTGGATCTC TCATTATGAG TATGGGTAGG TAAAAGACAT ACGCATTTTT GTATTCCTGT
TGCGTTGTAC TCTCTGACAA CTTCGTTTCT TCCGTCTCGA AGGAGTCCCC GCAATTGACC
CTTATCCGCT CAAGTTTGTC TACAATGTTT CACAGATTAT GCTTTGTGCT TACATGACCA
TTGAAGCCAG TCTTCTAGCT TATCGTAACG GCTACACATT CTGGCCTTGC AACGACTGGG
ACTTTGAAAA GCCGCCTCTC GCTAAGCTCC TCTGGCTCTT TTACGTTTCC AAAATTTGGG
ATTTTTGGGA CACCATCTTT ATTGTTCTCG GGAAGAAGTG GCGTCAACTT TCCTTCCTGC
ACGTCTACCA TCACACAACC ATCTTTCTCT TCTACTGGTT GAATGCACAT GTAAACTTTG
ATGGTGATAT TTTCCTCACC ATCGTCTTGA ACGGTTTCAT CCACACCGTC ATGTACACGT
ACTACTTCAT TTGCATGCAC ACCAAGGTCC CAGAGACCGG CAAATCCTTG CCCATTTGGT
GGAAATCTAG TTTGACCAGC ATGCAGCTGG TGCAGTTCAT CACGATGATG ACGCAGGCTA
TCATGATCTT GTACAAGGGC TGTGCTGCTC CCCATAGCCG GGTGGTGACA TCGTACTTGG
TTTACATTTT GTCGCTCTTT ATTTTGTTCG CCCAGTTCTT TGTCAGCTCA TACCTCAAGC
CGAAGAAGAA GAAGACAGCT TAAGCGAAAT TTGGGTCTAC GTAAAAATAA GTACGTTAC
 
Protein sequence
MMVPSSYDEY VVMVNDLGDS ILSWADPDHY RGHTEGWEFT DFSTAFSIAV AYLLFVFVGS 
LIMSMGVPAI DPYPLKFVYN VSQIMLCAYM TIEASLLAYR NGYTFWPCND WDFEKPPLAK
LLWLFYVSKI WDFWDTIFIV LGKKWRQLSF LHVYHHTTIF LFYWLNAHVN FDGDIFLTIV
LNGFIHTVMY TYYFICMHTK VPETGKSLPI WWKSSLTSMQ LVQFITMMTQ AIMILYKGCA
APHSRVVTSY LVYILSLFIL FAQFFVSSYL KPKKKKTA