Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12925 |
Symbol | |
ID | 7201469 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | + |
Start bp | 761229 |
End bp | 762610 |
Gene Length | 1382 bp |
Protein Length | 255 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180504 |
Protein GI | 219119489 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGGTCCG GGCCCGGGGA TCCCGATTTG TTGACAGTGG CGGCCTATAA ACTTTTGACG TCTGATCCGG ATGCGCTCGT CGTGGCCGAC AGACTCGTCA GCCCAGAAAT TCTGGCTCTC ATTCCTGGCG AAGTCAAGGT CGCACGCAAG TTACCGGGGT GCGCCGAACT TGCGCAAGAA GAAATATACT GGTGGTGCTA TCAAGGCTTG AATCAAGGAC GTCACGTGAT CCGACTCAAG ATCGGTGATC CCTTTGTGTT TGGACGTGGA GGTGAAGAAA TATTGGCCTT TCGAGATTTT GGTGTGGAAG CGGCAGTGGT ACCGGTACGT ACAAATCATG ACCCCGCAAC GCTCAATCTT ATCCTCGCTG TTTTGTCCTC AACCTTGCGC TTTCATTCTG GACCCCAGGG TGTATCGTCA GCTTTTTCCG CTCCGCTTTT GGGAGGCATT CCGGTGACAC ACCGCGGAGT CGCGCAGCAG GTCGTCATGT GCACTGGCTA CGGGAGGGAG GGGTCCTCCC CTGATCTCAT TCAGTATCAC AAGGAGCAAA CAGTGGTATT CCTGATGGCG GTAGGACGGC TGCGATCACT ATGTGATAAA CTGATTGAAT TGGCGGGGTA TCCCCGGGAC ACACCGGTAG CGATTGTGGA AAAAGCGGGT TGCCCCGAGC AACGCACCGT TGTCGGAAAC ATGATGACGA TTGCTGATAT CGCCGAAGAG CACAAAATCA AACCACCGAG TGTCATTGTG GTGGGAGAGG TTGTGAACGC GTTACATTTG GAAGACGAAA AGTCTGGCAT GCAAGTGTCC GGTTTGCTTC AGAACTACAC GGCGTCTTCG TAGTAAGCAG AGATACTGGA TGCACAAAAC ACTACACAAC ATATGTAAAC CTCTCCAATA ATTTTGAAAA CTATTATGTA CATACTGCAT TCTCTGTATA GGATGTTCGA ACGAAGCTGC TATTTTATAT TAGCACAACT TCTGAAACGT ATCTATGCGT GCAGCACGAA TGAAACCGAT TTTTGTTTTC GATCATACTT TCTTGAGAGA TAGACGCGTA GCTCGGGGCC CCATCGTTTG TGCACATGCA TAATCCTAAG CACGAATTTC GAGGCCCTTT TCTTGGAGTG ATTTGAGTCT GGGTTCCTCA GGCACTTTGC CTTGACACGC TTTCACCATA CGACCAGCAA CCTGTACTGA GCAAGTTGCG CAGTCTCCTT TACGACAGCT GTACTTGACC GGGACTGCAG TCAATGAGAG AAAGTGTCAG TACTGTTCTG TAATTCGCTC GTTGCTTGAG TCGTGACAAC GTACCTCCCA GAGCCTTGCA TGCATTGGAC AAAGGGCTTC CCGCCTTGAA ATCCTTTTTC TTGCCATTAT AG
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Protein sequence | VGSGPGDPDL LTVAAYKLLT SDPDALVVAD RLVSPEILAL IPGEVKVARK LPGCAELAQE EIYWWCYQGL NQGRHVIRLK IGDPFVFGRG GEEILAFRDF GVEAAVVPGV SSAFSAPLLG GIPVTHRGVA QQVVMCTGYG REGSSPDLIQ YHKEQTVVFL MAVGRLRSLC DKLIELAGYP RDTPVAIVEK AGCPEQRTVV GNMMTIADIA EEHKIKPPSV IVVGEVVNAR DNVPPRALHA LDKGLPALKS FFLPL
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