Gene PHATRDRAFT_12888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12888 
Symbol 
ID7201400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp18648 
End bp19256 
Gene Length609 bp 
Protein Length202 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180552 
Protein GI219119591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.171382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGGGTCGTC AAGGGAGTGT GACACGAAAA ACCAAGGAGA CATCTATATC TGCAACGCTG 
CGCATGGACG GCAGTGAACT AGGTGTCCAT GTCAATTGCG GCATTAAGAC GTTGGATACT
TTCCTGACTT TACTCGCCAC CACTGCTTGC ATGAGTTTAG ATTTGACCTG TCACGGCGAT
TTATGGATCG ACGAACATCA CACTGCCGAG GACGTGGCAA TCGCCTTGGG ACAAGTATTG
ACGGACGCCC TTGGTACCAA GGCAGGTTTG AATCGTATGT GGTGTGCGTC AGCGGAACAG
AATCAAACGA AAATTGAAGT TACCATGGAT CTGTCAAATC GACCATGCTT TACGCATAAT
CTTGGTCTAG ACAATGGGGA AGAAATGGTC GGTGATCTGT CTTTGGAAAT GTTTGAACAC
ATCTTGGATT CGATCGTGGT GAATGCCCGC ATGACGGTAC ACATTCTGGA AGTATATGCC
ACAAACAATT TGGAAGACAC CGTTCAAGCT GTAGCAATTG CTTTTGGCCA GGCTCTTAAG
TATTGTGCCA TGGTGGATAG TCGACGTGCT GGCGCAACGG CCAGCAGTAA AGGCACTCTA
TCGGTGTAG
 
Protein sequence
LGRQGSVTRK TKETSISATL RMDGSELGVH VNCGIKTLDT FLTLLATTAC MSLDLTCHGD 
LWIDEHHTAE DVAIALGQVL TDALGTKAGL NRMWCASAEQ NQTKIEVTMD LSNRPCFTHN
LGLDNGEEMV GDLSLEMFEH ILDSIVVNAR MTVHILEVYA TNNLEDTVQA VAIAFGQALK
YCAMVDSRRA GATASSKGTL SV