Gene PHATRDRAFT_12887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12887 
Symbol 
ID7201454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp340317 
End bp340889 
Gene Length573 bp 
Protein Length191 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180617 
Protein GI219119727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGCTACATGT GCTTCGATGA AGAAGATTCC GAAGAAAACC CAATGATCAC TCCCTGTAAA 
TGTAGCGGAG ATACCAAGTA CGTCCATGTG GATTGTCTCC GCAAGTGGCA TACGGCGGAA
GCCGACAACC AGATCTGCTT CCTCTCGTCT GTCGACGCCA CCTGTTCCGT CTGCAAAAGT
ACCTTCAAGT CCGATTTTAA GCTCAAGGAT GGACGTCACC TTAAGCTATT CAAGTCCTCC
TTGGAGCCTC CATACGTTTC GCTGCTGGTG GCCACCAAGC ACGAAATGGC CCAGCGGCTT
TTCAACACGC GATTCCAGCT ATCCTTTAGC ACCCTGATGA AGCCCGATGG CAAAAACGCT
ACACGCCCGC TACTTTTGGG GCGCTCTTCT GGATCCGACA TGGTCTTGGA TTATCGCACG
GTCTCTGCTC GCCACGCCTC TATTCGCTTT AAGAATGGGG AATTCATCTT TACGGATGGC
GGCTCGTCCA ACGGCTCCTA TCTTTATTTA CGGAAGCCCT TGGAACTGTC CCCATCCCAG
GCCGTACAGT TTCGTCTGGG GCGTTCGATG ATC
 
Protein sequence
CYMCFDEEDS EENPMITPCK CSGDTKYVHV DCLRKWHTAE ADNQICFLSS VDATCSVCKS 
TFKSDFKLKD GRHLKLFKSS LEPPYVSLLV ATKHEMAQRL FNTRFQLSFS TLMKPDGKNA
TRPLLLGRSS GSDMVLDYRT VSARHASIRF KNGEFIFTDG GSSNGSYLYL RKPLELSPSQ
AVQFRLGRSM I