Gene PHATRDRAFT_12799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12799 
Symbol 
ID7201299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand- 
Start bp695127 
End bp695858 
Gene Length732 bp 
Protein Length244 aa 
Translation table 
GC content51% 
IMG OID 
Productprohibitin-like protein 
Protein accessionXP_002180691 
Protein GI219119880 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.15456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AACTCCGTCT ACACCGTGCA AGGTGGACAC CGTGCCGTAG TTTTCAACCG GCTGGTAGGT 
ATGAAAGAAA CCGTCTACGG CGAAGGTTTG AATTTCAACA TTCCCTGGTT GGAACGTCCC 
ATCATCTACG ATATTCGGAC GCGTCCCGTG AATTTGCAAA CGCTCACCGG TAGCAAGGAT 
TTGCAAATGG TCACGATTGC GATTCGTGTT TTGCACAAAC CCAATCCCAA CCAACTCGTT 
TGGATTTATC GCATGCTTGG AATCAACTAC GACGAGCGCG TCTTGCCTTC GATCATGAAT 
GAATGTGCCA AAGCTGTCGT GGCACGCTAC AACGCCAACG AGCTCCTCAC CAAGCGTGAC 
GTGGTGAGCA AAGAAATTTC GTTCGACTTG GAGAAACGCG CCCGTATCTT TAATATTCAG 
CTCGAGGATG TCGCTATTAC CCACTTGGCA TTTTCGCCTG AGTACGCGCG GGCTGTAGAA 
GCCAAGCAAG TTGCGCAGCA GGATGCTGAA CGTGCCAAGT ACATCGTGCT CGGTGCCCAG 
CAGGAGAAGA AAACCATCAT TACCAAGGCT CGTGGAGAAG CCGAGTCGGC GGAATTGATT 
GGTACCGCAG TGCGCCAGAA TCCGGGCTTT ATGAAACTTC GACGTATTGA TGCCGCTCGG 
GATATTGCAG ATATTGTGGC TTCTAGCGGC AACAAGGTAT ATTTGAACGC TGATTCGCTC 
TTGTTGAACC TT
 
Protein sequence
NSVYTVQGGH RAVVFNRLVG MKETVYGEGL NFNIPWLERP IIYDIRTRPV NLQTLTGSKD 
LQMVTIAIRV LHKPNPNQLV WIYRMLGINY DERVLPSIMN ECAKAVVARY NANELLTKRD 
VVSKEISFDL EKRARIFNIQ LEDVAITHLA FSPEYARAVE AKQVAQQDAE RAKYIVLGAQ 
QEKKTIITKA RGEAESAELI GTAVRQNPGF MKLRRIDAAR DIADIVASSG NKVYLNADSL 
LLNL