Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12620 |
Symbol | |
ID | 7201209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | + |
Start bp | 741124 |
End bp | 742722 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180498 |
Protein GI | 219119476 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAAAATATTT TCCTCAACGA TTTTGATTTC GAAAAGCTAG GCATCGGCGG TTTGGACGCC GAATTCAACC GCATCTTTCG ACGGGCCTTT GCGTCACGAA TCTGGCCACC GCACATTATT CAGCAAATGG GCATTGCGCA CGTGCGTGGT ATGCTGCTCT ATGGACCGCC GGGCTGCGGA AAAACACTCA TTGCGCGCCA GATTGGCAAG GCGCTCAATG CGCGTGAACC GAAAATTGTC AATGGACCGG AGATTCTCAA CAAATTCGTT GGCGGGTCGG AAGAGAAAAT TCGGGAGCTC TTTAAAGAAG CCGAGCAGGA ACAACTGGAA ATGGGAGATA ATTCTATGTT ACACATTATC ATTATGGACG AGATGGACGC CATTTGCAAG CAGCGTGGGA CGGTTAAGGA TGGAACGGGT GTACAGGACT CAGTAGTTAA CCAGTTGCTC TCCAAGATCG ATGGTGTTGA TTCGCTCAAC AATATCTTGT TAATTGGCAT GACTAATCGT AAAGACATGA TTGATGATGC CTTATTGCGG CCCGGGCGTC TCGAAGTACA CGTGGAAATT GGATTGCCCG ATACGGCCGG TCGCTTGCAG ATTCTTAATA TTCACACGAG GAACATGCGC AAGGCTAACC GGGTCCTGCA GGATGTCTTG GACCGGTTGC CTGAACTAGC CGAACGGAGC AAGAACTTTT CCGGTGCCGA GCTTGAGGGT CTCGTCAAGG CCGCATCATC GTACGCCTTG ACACGCTGCG TAGACGTTAA GGACTTGACT AAGGCACCCG ATACGAAGAA TTTGATGTTG CGCTGGGAAG ACTTTGAACG CGCTCTGGAA GATGTGGAGC CCAAATTTGG TGCCAAGAGC CAAGAACTCA AGGCTTATTA CCGGAACGGA TTTGTTCCAT ACGGCGAATC GTTTGATTTA CTCATGGGCA CTTTGGAGCG GTTGGTGGAA CAAGTACGAA CATCGACACG AACGCCGCTC ATGTCAGTCT TGTTGCAAGG CCCACCATCG GCGGGGAAGA CAGCCATCGC TGCGAAAGCG GCCGTCGATT CGGGGTACCC TTTCGTACGC ATGATTTCCG CAGATGAAAT GATTGGGTAC TCAGATGTGA GCAAATCCCA AATGATTCAC AAGGCGTTCA TGGACTCGTA CAAGTCACCA TTGTCGCTAA TTTTTATTGA CGATCTTGAA CGCATTATTG ACTACGTTCC AATTGGACCA CGGTTCAGTA ACACTGTACT GCAGACACTC TTGATTTTGC TGAAAAAAGT TCCGCCGGAT GAAGGGCGTC GTTTACTGGT GATCGGTACC ACGTCTTGCC CACATTTACT AGAGGATTTG GGATTGGTCC AAGCATTCGG GGTCACGCAA AGCATTCCTT TGTTGGACGA TCCTGTGAAC GTTGTGGAGG TGCTGCGTAC CGCTGCTCAT ATGAGTGAAA TGGATGCACA GGCCATTGCC AAAGCCATCA ACAAGCCTAT TGGTATTAAG CAGCTTTTGA TGGTTGCCGA AATGGCGAAA CAAGGATCAG AAGGTGGTCG CGTGGATCCT AGCGTTTTTA TGGAATGCCT TCATACAGTT GGGTATTAA
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Protein sequence | QNIFLNDFDF EKLGIGGLDA EFNRIFRRAF ASRIWPPHII QQMGIAHVRG MLLYGPPGCG KTLIARQIGK ALNAREPKIV NGPEILNKFV GGSEEKIREL FKEAEQEQLE MGDNSMLHII IMDEMDAICK QRGTVKDGTG VQDSVVNQLL SKIDGVDSLN NILLIGMTNR KDMIDDALLR PGRLEVHVEI GLPDTAGRLQ ILNIHTRNMR KANRVLQDVL DRLPELAERS KNFSGAELEG LVKAASSYAL TRCVDVKDLT KAPDTKNLML RWEDFERALE DVEPKFGAKS QELKAYYRNG FVPYGESFDL LMGTLERLVE QVRTSTRTPL MSVLLQGPPS AGKTAIAAKA AVDSGYPFVR MISADEMIGY SDVSKSQMIH KAFMDSYKSP LSLIFIDDLE RIIDYVPIGP RFSNTVLQTL LILLKKVPPD EGRRLLVIGT TSCPHLLEDL GLVQAFGVTQ SIPLLDDPVN VVEVLRTAAH MSEMDAQAIA KAINKPIGIK QLLMVAEMAK QGSEGGRVDP SVFMECLHTV GY
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