Gene PHATRDRAFT_12620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12620 
Symbol 
ID7201209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp741124 
End bp742722 
Gene Length1599 bp 
Protein Length532 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180498 
Protein GI219119476 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAAATATTT TCCTCAACGA TTTTGATTTC GAAAAGCTAG GCATCGGCGG TTTGGACGCC 
GAATTCAACC GCATCTTTCG ACGGGCCTTT GCGTCACGAA TCTGGCCACC GCACATTATT
CAGCAAATGG GCATTGCGCA CGTGCGTGGT ATGCTGCTCT ATGGACCGCC GGGCTGCGGA
AAAACACTCA TTGCGCGCCA GATTGGCAAG GCGCTCAATG CGCGTGAACC GAAAATTGTC
AATGGACCGG AGATTCTCAA CAAATTCGTT GGCGGGTCGG AAGAGAAAAT TCGGGAGCTC
TTTAAAGAAG CCGAGCAGGA ACAACTGGAA ATGGGAGATA ATTCTATGTT ACACATTATC
ATTATGGACG AGATGGACGC CATTTGCAAG CAGCGTGGGA CGGTTAAGGA TGGAACGGGT
GTACAGGACT CAGTAGTTAA CCAGTTGCTC TCCAAGATCG ATGGTGTTGA TTCGCTCAAC
AATATCTTGT TAATTGGCAT GACTAATCGT AAAGACATGA TTGATGATGC CTTATTGCGG
CCCGGGCGTC TCGAAGTACA CGTGGAAATT GGATTGCCCG ATACGGCCGG TCGCTTGCAG
ATTCTTAATA TTCACACGAG GAACATGCGC AAGGCTAACC GGGTCCTGCA GGATGTCTTG
GACCGGTTGC CTGAACTAGC CGAACGGAGC AAGAACTTTT CCGGTGCCGA GCTTGAGGGT
CTCGTCAAGG CCGCATCATC GTACGCCTTG ACACGCTGCG TAGACGTTAA GGACTTGACT
AAGGCACCCG ATACGAAGAA TTTGATGTTG CGCTGGGAAG ACTTTGAACG CGCTCTGGAA
GATGTGGAGC CCAAATTTGG TGCCAAGAGC CAAGAACTCA AGGCTTATTA CCGGAACGGA
TTTGTTCCAT ACGGCGAATC GTTTGATTTA CTCATGGGCA CTTTGGAGCG GTTGGTGGAA
CAAGTACGAA CATCGACACG AACGCCGCTC ATGTCAGTCT TGTTGCAAGG CCCACCATCG
GCGGGGAAGA CAGCCATCGC TGCGAAAGCG GCCGTCGATT CGGGGTACCC TTTCGTACGC
ATGATTTCCG CAGATGAAAT GATTGGGTAC TCAGATGTGA GCAAATCCCA AATGATTCAC
AAGGCGTTCA TGGACTCGTA CAAGTCACCA TTGTCGCTAA TTTTTATTGA CGATCTTGAA
CGCATTATTG ACTACGTTCC AATTGGACCA CGGTTCAGTA ACACTGTACT GCAGACACTC
TTGATTTTGC TGAAAAAAGT TCCGCCGGAT GAAGGGCGTC GTTTACTGGT GATCGGTACC
ACGTCTTGCC CACATTTACT AGAGGATTTG GGATTGGTCC AAGCATTCGG GGTCACGCAA
AGCATTCCTT TGTTGGACGA TCCTGTGAAC GTTGTGGAGG TGCTGCGTAC CGCTGCTCAT
ATGAGTGAAA TGGATGCACA GGCCATTGCC AAAGCCATCA ACAAGCCTAT TGGTATTAAG
CAGCTTTTGA TGGTTGCCGA AATGGCGAAA CAAGGATCAG AAGGTGGTCG CGTGGATCCT
AGCGTTTTTA TGGAATGCCT TCATACAGTT GGGTATTAA
 
Protein sequence
QNIFLNDFDF EKLGIGGLDA EFNRIFRRAF ASRIWPPHII QQMGIAHVRG MLLYGPPGCG 
KTLIARQIGK ALNAREPKIV NGPEILNKFV GGSEEKIREL FKEAEQEQLE MGDNSMLHII
IMDEMDAICK QRGTVKDGTG VQDSVVNQLL SKIDGVDSLN NILLIGMTNR KDMIDDALLR
PGRLEVHVEI GLPDTAGRLQ ILNIHTRNMR KANRVLQDVL DRLPELAERS KNFSGAELEG
LVKAASSYAL TRCVDVKDLT KAPDTKNLML RWEDFERALE DVEPKFGAKS QELKAYYRNG
FVPYGESFDL LMGTLERLVE QVRTSTRTPL MSVLLQGPPS AGKTAIAAKA AVDSGYPFVR
MISADEMIGY SDVSKSQMIH KAFMDSYKSP LSLIFIDDLE RIIDYVPIGP RFSNTVLQTL
LILLKKVPPD EGRRLLVIGT TSCPHLLEDL GLVQAFGVTQ SIPLLDDPVN VVEVLRTAAH
MSEMDAQAIA KAINKPIGIK QLLMVAEMAK QGSEGGRVDP SVFMECLHTV GY