Gene PHATRDRAFT_12612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12612 
Symbol 
ID7201339 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp272331 
End bp273378 
Gene Length1048 bp 
Protein Length258 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180402 
Protein GI219119277 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTGC CGTGTCAGCT GCTGGGAATG AACTGCGCCA CGCCTACCGA ATTTGCACTA 
TCGTGGCCGG ACTTTTGCCA ACGAGGTGGC GGCACAGATA TTCACGCCGA TGGTTGGGGA
CTTGTAAGTG TGCAAGCTTC TGTTTCGAAA AGGGAATGGC ATGTATTTTA CTGCGAACGT
TATTGTCGTA AATACTACCT CCCTCCGTCA CCCTTGAGCG TACGAAAGTC CCACCCGTTC
AAGTTTATCG ACTTTTGCAT CTAGCACCTT ATACTCTTGT TGCTTTTTCA CAGGCTTACT
ACCACGGACA CGGTGTCAGA CAATTCCACG ATACGGAAGC GGCGTCTTCG TCACCTCTGG
CACATTTTCT GGGCCAGCAA TCAATTAAGA CCCGGAACAT GCTATCGCAC ATTCGATACG
CGACATCCGG TGCTGTGGAG CTGGCCAATC TACATCCTTT CAGTAGAGAG ATGTGGGGGA
TTCAATGGTG CTTTTGCCAC AACGGTCAAG TACCGATGAT GGACGAGCAT CCAAAGAGCT
GGCTGGGGGA CGTCAAAGGA GGTAAGCCAA TACAAAAAAC GAAATCATTA TCGCTGTACA
TAAACAAGCT TCTTTCTCAC AAATCGAATC GCTAGATCCC ACATATTTTC CAGTCGGTAA
GACGGACAGT GAGGCCCTGT TCTGTGCTCT TCTCAATGCT CTTCGAGCAG AATTTACGGA
TACCATGCCC AGTCTTCCCG TCCTATATGA TGCACTCAAA AAGCTGTGTG ATGAAGTTGT
CAAATACGAC CCGAGCGGTA CGATACTAAA TTTCATGCTC ACTTGTGGGC CGAATGTGCT
ATGGGTGTAT AGCTGGCCTG GCAAACGTCC AGGCGGCAAA GTATGGAACG GGCTACACTA
CACGGTTCGT GGGTCTTCCA CCCAGCTTGC CGATAGCGAC TACTCGGTTG GAGTTTCCTT
ACCAGGATCG GAGGATGACC GAGTTTGCAT CGTCGCAACC AAGCCACTGA CAGAGGATGA
AGAATGGGTC GAGTTGAAAC CGGCTGAG
 
Protein sequence
MALPCQLLGM NCATPTEFAL SWPDFCQRGG GTDIHADGWG LAYYHGHGVR QFHDTEAASS 
SPLAHFLGQQ SIKTRNMLSH IRYATSGAVE LANLHPFSRE MWGIQWCFCH NASFSQIESL
DPTYFPVGKT DSEALFCALL NALRAEFTDT MPSLPVLYDA LKKLCDEVVK YDPSGTILNF
MLTCGPNVLW VYSWPGKRPG GKVWNGLHYT VRGSSTQLAD SDYSVGVSLP GSEDDRVCIV
ATKPLTEDEE WVELKPAE