| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_12587 |
|---|
| Symbol | |
|---|
| ID | 7201371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011677 |
|---|
| Strand | + |
|---|
| Start bp | 451066 |
|---|
| End bp | 452919 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180437 |
|---|
| Protein GI | 219119349 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.091239 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CCCGGCGTCG CGCCCGAGTT GTACGAAGGC GCCGAAACGG TCTTTATGTT CACCGACTTG
GTGCAGTCCA AAAAGACGCA CGTTCCGTTC GAATTCTACG ATTTGCCCTC CTGCGATGCC
CCCGTCATGA ACAACTTTCG CCGCAAGCAC AAGACGCAAC GCAAGAACCT CGGAGCGCGC
TTGCAAGGCG TAGAACTCAA GCCCGCACCC TACGTTCTCA AGATACTGCA GAACATCAAC
TGCATGACTT TGTGTGAACG AAATTTGGGA TTCCGTGAGG TCAAGAGTCT ACGCAAACTT
GTGGAACGAC AGTATCGCGT GCACTTTACC TTTGATCAGC TCCCCGTACT CATGCGCTCC
TCGGAACTCA ACTACGCCGT GCGCGGGTAT CCCGTCGGCT TCAAGGCACC ACCTTCCTAC
ACCGGTCTCG ATCACGATGA ATTCTATCTA TACAATCATC TCAAGTTCAC TATTACCTAC
CAGCCAGGAC AAGGCGACGA GAGCAGTGGT GTATACATTA CCGGGTTCGA TGTCCATCCC
GTATCGATTC GGCACGGGCC GGATACCTGC AGCAACGACG AAGAGGACGG TGGTCCCATC
AACGATCCGT CGTCGTACTT GCCCCTCACC ATGACAACAT CGGGGCAGAA GAACACGGTC
GCCTACTCTT ATTCCGTCGA ATGGATTGAG TCAGCTTTAC CCTGGGCCGA TCGTTGGGAC
GTCTATCTCA TCGGAAGCCC GGACGATGAC ATTCACTTTT TTGCCATTGT CAATTCACTC
ATGATCGTCC TCTTCTTGAC TGGAGCGATT GCTACGATTA TGATTCGTAC CCTCAAGAAG
GATATTTCGA GTTACAACGA AATGTCCATG CTCGAAGACG GCGGGGCTGA AGAAACGGGA
TGGAAACTGG TACACGGAGA CGTCTTTCGT CCACCGTCCA CGTCGCCGAT GGCCTTGTCG
GTTTTGGTCG GAACCGGTGC GCAAATCGGA ACCGCCTTTT TCATCTCCAT GCTTTCGGCG
GTATTCAAAT TACTCAACCC CATGAGAAAA GGACAAACTC TTACTGCCAT TCTCATTCTC
TACGTGCTTT GCGGATCCGT TGGTGGCTAC GTGTCGGCCC GCATTTACAA ATTTTGTGAT
GCCAAGGCTT GGAAAATGAA CGCCATCTTG ACGGCTACCG CCTTACCCGG AACCCTCGTT
TCCATCTTTA CCGTACTCAA TATATTTTTG AGTATTGCCG GAGCCGCCAC GGCCGTTTCC
TTTTGGGTTT TGTTGGCTCT CTTTCTCTTG TGGACGTGCG TTTCTGCGCC ATTGGTTTTC
GTCGGCTCCT TTTTTGGTTT GAAGCAGGGC AAAATTGAAA TTCCTAGCCG CGTCAATCAA
ATTGCTCGGG TCGTCCCACC CTTGCCCTGG TATAGTTCGC CTCCCATCTC ATTCTTGCTC
GGTGGTGTGC TTCCCTTTGG CTCGGTCTGC ATTGAACTGT TCTTTATCAT GAGTGCTCTC
TGGTTACATC AGATTTATTA CGTTATGGGA TTCTTGCTCG CCGTCCTGAT TATCTTGGCC
GCGACTTGTG CTCAAGTCAG TATCGTCATG GATTATTTGC AGCTATGCAG CGAAGATCAC
CGTTGGTGGT GGAAATCATT CGGTAACTGT GCTTCCGGCG GCGTGTATCT GTTCGGGTAT
TCACTTTGGT TTTTGGCCTC GCGATTGGAC CTGGTCGGGG TCTTGCCCGT GGTGGTGTAT
CTGACCTATA TGAGTATGAT CAGTCTCTTG TTCGGAGTCT TCTGTGGCAG CGTCGGCTTT
CTCTGCTCTT TCTGGTTCAA CCAAAAAATT TACGCTGCTC TCAAGGTAGA TTAA
|
|---|
| Protein sequence | PGVAPELYEG AETVFMFTDL VQSKKTHVPF EFYDLPSCDA PVMNNFRRKH KTQRKNLGAR
LQGVELKPAP YVLKILQNIN CMTLCERNLG FREVKSLRKL VERQYRVHFT FDQLPVLMRS
SELNYAVRGY PVGFKAPPSY TGLDHDEFYL YNHLKFTITY QPGQGDESSG VYITGFDVHP
VSIRHGPDTC SNDEEDGGPI NDPSSYLPLT MTTSGQKNTV AYSYSVEWIE SALPWADRWD
VYLIGSPDDD IHFFAIVNSL MIVLFLTGAI ATIMIRTLKK DISSYNEMSM LEDGGAEETG
WKLVHGDVFR PPSTSPMALS VLVGTGAQIG TAFFISMLSA VFKLLNPMRK GQTLTAILIL
YVLCGSVGGY VSARIYKFCD AKAWKMNAIL TATALPGTLV SIFTVLNIFL SIAGAATAVS
FWVLLALFLL WTCVSAPLVF VGSFFGLKQG KIEIPSRVNQ IARVVPPLPW YSSPPISFLL
GGVLPFGSVC IELFFIMSAL WLHQIYYVMG FLLAVLIILA ATCAQVSIVM DYLQLCSEDH
RWWWKSFGNC ASGGVYLFGY SLWFLASRLD LVGVLPVVVY LTYMSMISLL FGVFCGSVGF
LCSFWFNQKI YAALKVD
|
|---|
| |