Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12550 |
Symbol | |
ID | 7201164 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 515148 |
End bp | 516059 |
Gene Length | 912 bp |
Protein Length | 283 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180658 |
Protein GI | 219119812 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGGTCCACG AAGAGTTGCA AGGAACTTTG CCAACGGAGC TAGGGATGTT GGAATTCCTG ACTCGCTTGG AGCTTCAGTA CAACGAACTC CATGGCAGTA TCCCTGACAA CTATTCCTAC ATCCCAAGAC TGCGATTGAT TGATCTAAGT CATAATGACC TCAGTGGCTC GATACCGGAA ACTTTAGGGA CGCACTCCAC TCGATTGGAA GGAATCCACA TCGCCGACAA TCATCTCATA GGCCAAATTC CGCCTAACTT AGTGGCCTGG TCAAACCTGC GGCATTTTGA TGTGAGCAAT AACGTGCTAA CGGGGACGAT ACCGGATGCA CTATTCGAAT TGAAAAATTT GAAATACTTG GTTGCCGCCG ACAACTGGAT ATCTGGAGAG TTGCCAAGCC GCGTTGCGAA CTTATCCAGC CTTCGTTTAC TAGATCTGGG ATCCATGCTT CTTTGTGGAC CCCTTCCTTT CAACATTAAC CAACTGAAAA GTCTGCAGGA CTTGAATTTG GGTGACAACC GTTTCACGGG AGCTCTACCA TCTGAGATTT GGGACCTGTC TGAACTCCAA ACATTCCTTG CTTCCAACAA TCAATTCACG GGAACTCTGC CAACCTCGGC CAAAGAGGTT GGCTGGCACG AACTGACAAA TCTTAGTGTA CTCCGTCTAG ATAACAATCG TCTAACAGGC TCGATTCCGC GTGACCTTTT TGTTGGACTC AAAGCGTCGC TGCAATGGTA AGCAATACAG GAAGAACAAG GTTTTGAGCG TCATTGACAC TTTGACTAAC TCTATGAAAG GTTGGACTTG AGCTACAATC GTCTTTCGGG AACAATTGCT ACTGAAATTG GACAGATGAT AAGGTTGCGC ACAATCGACG TCATGGCCAA CATGATCAGC GGATCTCTTC CT
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Protein sequence | LVHEELQGTL PTELGMLEFL TRLELQYNEL HGSIPDNYSY IPRLRLIDLS HNDLSGSIPE TLGTHSTRLE GIHIADNHLI GQIPPNLVAW SNLRHFDVSN NVLTGTIPDA LFELKNLKYL VAADNWISGE LPSRVANLSS LRLLDLGSML LCGPLPFNIN QLKSLQDLNL GDNRFTGALP SEIWDLSELQ TFLASNNQFT GTLPTSAKEV GWHELTNLSV LRLDNNRLTG SIPRDLFVGL KASLQWLDLS YNRLSGTIAT EIGQMIRLRT IDVMANMISG SLP
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