| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45828 |
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| Symbol | |
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| ID | 7200942 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011676 |
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| Strand | + |
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| Start bp | 399883 |
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| End bp | 402741 |
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| Gene Length | 2859 bp |
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| Protein Length | 805 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180036 |
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| Protein GI | 219118531 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00551122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAACGAACGA ACACTGGTCT TCCCGCGTCA CAGTCCCCTC GGTTACCTTC CGTGTGTATT
ATATTCCACA GACGACAGTA CTACCATGGG AGGATCCGGA TTGGCAACTG GCGCTGGCAC
ACGCGTCGAT GTGACGCTCA AGCTTCCGCA GCTGCAGAAC TTGTGCAAGC GCGATCCGGA
AGGATACCGG GAGGACTACG ACGCCCAAAC GCGACGTTTG GAATCCGAGG TCGGCATTCT
CGCGTTGCAG CCCAATCACG AACCATCTCC TCGGCTCGTG GAACTCATAC AGTTCGCCGC
CGCCGTATCC AGTAGCTCGT ACAAAGGCCA TGAGTCGGAT CGGATCGCAA ACATGCTCAT
GAACCTGTTG GTTGGCGGTG GAGAAGGAAA CACCCAGACT TCCTCCAACA CCGTTACGGT
TGAGGAACGA ACCATCGTGC AGCAACAATC CGTCCAAAAC GTCAGTACCA TGCCGGCGGC
GGCACTTCAA TTGCACCGGG AAGTCCGCAA GACCTGCGTA TCCGCCTTGA TTCTTATGCG
CAACAAGGGC GTCGTGGAAC CTTTGCGTCT CCTCGAACTC TTTTTCCGTC TCATGGCCGT
TCTTCCCGAC AAGGCCTTGC GCGAATTGCT CTATAAGCAC ATGGTCAATG ATATTCGCAA
TCTCAACAAA AAGGGCAAAC GAGACGACAA GGTCAATCGC GCTGTCCAGT CCTTTCTGCA
CCGAATCGTG GCCTTTCACG GTTCCGACGC GGGGAATGGC GGTGCCGAGG CCGCGACGGA
CGTGGCAGCC AAACGCGCGA CCGACCTGAC CTGCGAACTC TACCGACGAC GCGTATGGAC
AGATGACCGG GCCGTGGCCA TCCTGGCATC AGCCACACAG TCTGCCAATT CTACCGTCAT
GTGCCGGGCC ATGCGATTCT TTCTGGGCAT TGAAGAGAAA ATGGCTCTAG ACGACAGACG
ACAAGAAGAA GAGGATTGGG AATCTAAGAA TCATATCGAT TATCACTCCC ACTCGAAAAA
GACCAAGGCC AATGCGCGCC ACGTGGCCAG ACAGGTTAAA AATCGCAAGA AGGTGCAGGT
TAAGAAAGAA AATAGTGATT GGATGGAAGC AGATCCCAAA AAGGACAAGG GCGTGGAAGC
TTCCAAAAAG CTCTATCCCG CCATTGAAAT GCTGCGCGAT CCACAGGGAC TTGTTGAAGC
TACTTTCAAA CGGCTCCGCT CTGCCAGTTC CTGCAAGTAT GAAGTCAAAC TTTTGATGAT
GAATTTTGTC ACTCGAATAG TCGGCAATCA TGAGCTGATG CTCCTTCCCT TGTATCCTTT
CTTGCAAAAA TACATGGGAG GTAGTCAACG AGATGTAACG GCCGTATTAG CCTACTGTGT
CCAAGCTTGT CACGAACAGG TACCTCCAGA TGAGGTCTAC GGTATCCTGA AAACCATTGC
ACATAACTTC ATCACGGAAC GCTGCTCGGA AGAACAAATG GCCGTCGGAA TCAACGCTGC
TCGAGCAATT TGTGCCCGCG TTCCTTCAGC CTTGTCGGTG GAGGAGGGAA ACGAAATTTT
GACGGGCGGA ACTTCTATGG ACGTCGAAGC CTTTGCTAGA GACTTAGCGG CGTACTCGAA
TCATCGTGAT CGCAGCGTTT CGATTGCTGG AAAGGCATGG ACCAACTTTA TTCGTGAGGT
CCATCCTGGT CTATTGCAAG GCAAAGATCG TGGTCTTCTG GGTTCTGCTT TGCACAAAAA
CGGTGCCAAG CCTCTTCGTT ATGGTGAGAA AGAAGTTTCG GCGGGTGTGG AAGGAGCCGA
CCTGTTGCTC GAGTACGAAT CGAAAAAGGC AGCGTATCTT CGCAAGAAAC GAGATCAAGG
CGATGAGGAC TATATATCGG ACGAGGATAG TGTGTCTGGA GAGTGGGAGG AGGTCGGAGA
AAATTCGGAA GACGAAGAAC CTCCAACATT GCTCAACATG GATGGCGAAA GCCAGCATGA
TTCTGAGCCG AGGAGGACGA CCTCAACGAT GATGGTGTTG TCGATGTTTC TAAATTGTCC
AAGGAAGAGC GTAACAAGCT GAAGCAACAA GCTTCATCAA CCCGCATTTT CTCTGCTGCA
GAGTTTGACA AAATGCGGAA GCTTGTGGAA AGAGAAAATC GTGCCAAACG CGATCCACGG
GAGGCTGCTC GTCGCAAACG GGCTATCGCT CAGGGACGAG AGTTCGAAGA AATTTCCGAC
GATTCCGATT CCGACGAAGA GATTCATGTG GCCGGTGCGG TCAACCCAAG AGATCTAATG
GCGGCAGCAA AGCGAAAACG ACAGAGCAAG GCTGAGAAAT TGCAAAAAAT TCTCGCTGGC
CGAACAAAGT TCGAATCGAA GCAGCGAGAG GGAGGTGCAA CCAACGAAGA AAAGAAGCGC
AAAAAGAACT TTCTCATGTC CAAAAGCAGT CGCGACGCTC GTGGGAAGAC TCGAGTGAAG
GGTGGGCTTG GGAAGAAGCA AGTGGAAAAG CAGACCGGGC ATGTTGCCAA GAAGAGAAGA
AGACGGCTTT GAGCTTACGA ATAGCGTGCT TGTCACTGTT AGTCTTTGCG CTTTTGTGTT
CCGACAATAG TTTGCTGCGA CCAGTAGGCA TCGCCATACG CAACGAAAAG TTCTTCCCCA
GGAAATATTT CTCGAGTTGT AACAATAGCA GCGCGGAATG CCTCGGGAAC ATATTCACAG
TTAATAATAA ATCGTCATTC AGCGGATCGT TGATATAACG TGCCTTTATG TGCATTAAGG
TTGCAGGATC GACAAGAACA TCTCCATTGA GGCTCATCAA ATAGCTTTTG TCCCGTAATA
TCTTTGAGGA TCGAAAGGTA TGTATGTGCC CAGAGTAAT
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| Protein sequence | MGGSGLATGA GTRVDVTLKL PQLQNLCKRD PEGYREDYDA QTRRLESEVG ILALQPNHEP
SPRLVELIQF AAAVSSSSYK GHESDRIANM LMNLLVGGGE GNTQTSSNTV TVEERTIVQQ
QSVQNVSTMP AAALQLHREV RKTCVSALIL MRNKGVVEPL RLLELFFRLM AVLPDKALRE
LLYKHMVNDI RNLNKKGKRD DKVNRAVQSF LHRIVAFHGS DAGNGGAEAA TDVAAKRATD
LTCELYRRRV WTDDRAVAIL ASATQSANST VMCRAMRFFL GIEEKMALDD RRQEEEDWES
KNHIDYHSHS KKTKANARHV ARQVKNRKKV QVKKENSDWM EADPKKDKGV EASKKLYPAI
EMLRDPQGLV EATFKRLRSA SSCKYEVKLL MMNFVTRIVG NHELMLLPLY PFLQKYMGGS
QRDVTAVLAY CVQACHEQVP PDEVYGILKT IAHNFITERC SEEQMAVGIN AARAICARVP
SALSVEEGNE ILTGGTSMDV EAFARDLAAY SNHRDRSVSI AGKAWTNFIR EVHPGLLQGK
DRGLLGSALH KNGAKPLRYG EKEVSAGVEG ADLLLEYESK KAAYLRKKRD QGDEDYISDE
DSVSGEWEEV GENSEDEEPP TLLNMDGESQ HDSEPRRTTS TMMEERNKLK QQASSTRIFS
AAEFDKMRKL VERENRAKRD PREAARRKRA IAQGREFEEI SDDSDSDEEI HVAGAVNPRD
LMAAAKRKRQ SKAEKLQKIL AGRTKFESKQ REGGATNEEK KRKKNFLMSK SSRDARGKTR
VKGGLGKKQV EKQTGHVAKK RRRRL
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