Gene PHATRDRAFT_45795 details

Gene Information

• Locus tag: PHATRDRAFT_45795
• ID: 7200807
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: +
• Start bp: 300749
• End bp: 303470
• Gene Length: 2722 bp
• Protein Length: 666 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002180011
• Protein GI: 219118479

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.189195
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CATGATGCGT GTCTTTTTCC GCGAAATTCC TTTTTTCCAA ACGGCATTTG CGCCATCTGA 
AAACTAGAAA CAGTCCGCCG CCCCGTGGTT TGATTTGCTC ACCTCTGGCT AACGCAAGAC 
CGATTTCGTT ACTCACCTCG CTAGCCCACC GTAGCCTTCA AGCCAGTGAA GATCAAACTA 
GATCCTCTCA CTGTCAAAAG CAACTCATCA AAAGCTTTCT CTATCTTCTA ACGATCATGA 
CGGACTCGCC GTTTCGTTAC GATGAAGCTC TGCTACGAGC TTGTGCCTCA TCCAACCCAG 
AGTCACAAAC CGCATCCTTG AACGATCCGC ACACAGTTTC TCAGACACTG TCCGCCGCCG 
ATACTTCCTT CCTCCTACGA CTCGAGGAGG ATACGATTCG CAGTACCGCC AAAAGTGCGA 
AGGACTGCTG CATCGTGTTG TTCCGTCAGC ACGCCGAACA TTACGGCAGA AGGATTCCGC 
TTGGAGGCAC TCGAGCGATG ACTGACGACT ACAACGTGTT CCAACGCTTT CAAAACTTTG 
TACAGAATGT TGTCTTTGTC CATGAACACA ACACCGAGGC TTGTCGACAT CCGGAGCAGC 
ACACAGTTAC TTTGAATCGC TTTTCCGATC AAAAGATGGA TGAAGTCCTT CCGGACAGCG 
ACAGCGACGC TGGACATGTT TGGCCTCATG GGCGCTCCTT GTGGGAATCT TGGCCCTTCT 
CAGAAGATGG GGACGAATGG AACTTGGAAA ATGAAGGTGT GCTGACCCAT TTATCGTCTC 
CAGAAATGAT ATACGACGTT TCGGCCAACT TGGCGATCGG GCACGGCTCC ATGAATCGCC 
TGAAACCGAA AAAGAAAAAG ACTACAGTTC AAGATGGACC GTCTCAAGTG TTGCGTATAC 
CGGTAAACGA TCCTGTACAA CTCCAACCAT TTCAGGTATT GGAGGGGTAC GATTCGGACA 
ATGATGGCGC ATTACTATCA ATAAAAATGT CCAAGCACTA CAAACGATCC AAGGCTGCTG 
TAGTCGATCA GACAGAAGAG GAAAAGACGG ATGACTATGG AACTTACTTA AACTGGGCAA 
CAGGGTCCAA TCCTGATGGT GTTCCAATCG TTCACGGAGC GTTTGACCAG GTACGTTGAT 
TTTAAGTCAG ATTGTTGTGC TCTTGCTGTT TTGCTCAATC AATTAATCTT CACCAGGGCC 
TTTGTGGGTC GTGCTGGGCA TTTGCCGCCG CGGGTTCCTT GGAAGCAAGC GCTTCGCGAA 
GAGCGGCGTA TGATGCTTAC AAAGGATACC AAACCACCTT TTTTCGACAG CCTAGCAACG 
AAACAGCTCG AACTCGCGCC ATTGCGTACG CTCAGCAGAT TGAGTTGGAA GCTTTTCAAA 
TGCTCAATCT TTCCGTCCAG GAGTTGTTGG ACTGTGATGT TGCGGCTGAT CAAGGGTGTA 
CTGGTGGTAA TCCCTTGCTT TCGTTTTACT ATATCCATAA GTATGGCCTC ACCAGTTGGC 
AGGATTATCC GTACGTTGGA TTCCAAGACG TCTGCCACAA AGATCGGGTC AAGCGCCCGG 
TAGCGACGGT GAAATCTTGG GGTATTATAT CTTCAAATCA TGAGGATCAT ATGGAACTTG 
TGCTGCGCTT CATTGGGCCC GTAGCTGTGG GCGTTAACGG TGCAAGCTCT TCGTTTCTCT 
CTTATAAAGG TGGTGTATAC GATATGCCGA GTTGCAAACA GACTGCCAAT CACGCGTTAT 
TAATTGTTGG ATATGGACAG GAAGTCCAGA TAGGTGGAAA TGTTACGAGA TACTGGATCG 
CGAGGAATTC GTGGGGGACT GGATGGGGGG AAAACGGGTA CATCCGAGTT CAACGCGGAG 
ATGGACGCAA AGGAACCCCG GGAGTTTGTG GTATAGCGCG GAGCCCGTCT GTTGCTCTAG 
GAGGGCTTCT TTTGAAGGAA CGGAGCATCA CTTTTACGTA TGGGGCCCTG GGTCGGAGTG 
GTGAAGGTAG CGACTATCCA GTACAACATT TCTGCACGCG ATGGGGGTTC GATCCAGAAA 
GTTTGTGCGG AAGCTTGGCC ACTTGGGTTG ATCTTCACAA AGCGACCACG CTTGGTCTGT 
TGGGTATATT CGTTGGGCTT TTGGCGCTTT GGCCGCTTTC CACTGATTGC CGTAGGCGTC 
GTCGTAGACG GCTGTTGCGG GAGCAGAAGC GACAAGAACA GCTGGATCAA ACTTGTCTGC 
CGATCGAAGA AGCCTCGCTA CTAGTCAAAT CAAAGACACA TTATGCCAAT CACAAGGAGT 
ACGGCGCAGC AAATCAGCCA TAGTGAATTC GGTTTTGCAA CATTTGGTTG CACTATTTAT 
TTCCGGCTTT TCGACAACAG AATAATTACT TTGGTTGCCA GCCTTTTCAG AAAGGAATCT 
TTACCTCGAA TGAGATGAAT TACAGTTGGG GTCTGAGCTG GGTCATTTTT GGTGAACGAG 
TTGTAAAGTG AACTACCTGT TGGGTATCGC TCGGTTTAAG AACAGATTGA TACGCTCGTG 
AAAACGAGCG GCGCGTGTAT AGGATTCGAC CCCCATACGT TTCGGATCGA GAGAAATAAT 
TTGTGCATAT TTTTTTCTCC TTCCCTGTTC TTTCTGAATG TTCTATACTG TCGTAAGTCC 
AAAGCGCCTA TAGCCAGAAC ATACGCGTAG GGTTCAATTT GCTTTCCTGC CTAAAATTAA 
GTTCTGGCGT TTGTCATTGT TC 

 

Protein sequence

MTDSPFRYDE ALLRACASSN PESQTASLND PHTVSQTLSA ADTSFLLRLE EDTIRSTAKS 
AKDCCIVLFR QHAEHYGRRI PLGGTRAMTD DYNVFQRFQN FVQNVVFVHE HNTEACRHPE 
QHTVTLNRFS DQKMDEVLPD SDSDAGHVWP HGRSLWESWP FSEDGDEWNL ENEGVLTHLS 
SPEMIYDVSA NLAIGHGSMN RLKPKKKKTT VQDGPSQVLR IPVNDPVQLQ PFQVLEGYDS 
DNDGALLSIK MSKHYKRSKA AVVDQTEEEK TDDYGTYLNW ATGSNPDGVP IVHGAFDQGL 
CGSCWAFAAA GSLEASASRR AAYDAYKGYQ TTFFRQPSNE TARTRAIAYA QQIELEAFQM 
LNLSVQELLD CDVAADQGCT GGNPLLSFYY IHKYGLTSWQ DYPYVGFQDV CHKDRVKRPV 
ATVKSWGIIS SNHEDHMELV LRFIGPVAVG VNGASSSFLS YKGGVYDMPS CKQTANHALL 
IVGYGQEVQI GGNVTRYWIA RNSWGTGWGE NGYIRVQRGD GRKGTPGVCG IARSPSVALG 
GLLLKERSIT FTYGALGRSG EGSDYPVQHF CTRWGFDPES LCGSLATWVD LHKATTLGLL 
GIFVGLLALW PLSTDCRRRR RRRLLREQKR QEQLDQTCLP IEEASLLVKS KTHYANHKEY 
GAANQP