Gene PHATRDRAFT_45750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45750 
Symbol 
ID7200899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp131936 
End bp132818 
Gene Length883 bp 
Protein Length262 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179978 
Protein GI219118408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0489312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGCC CTGATGGCAT GAACTGGACA AGCCAGAGAA GTGCTTCACA GGCTGAATGG 
AGAAGCATTA TGTACGGCAA TGGCATATTT GTTGCGGTTG CCAATGGTGG CATGGATGAC
AACCATGTCA TGACCAGTCC AAATGGCATC AATTGGACAA TGCAGGAAAG TCCTCCTGAG
ATAGATAACT GGAACAGTGT TACTTTTGGC ATGGAGAAGT TTGTTGCAAT CGGTGCCAAC
ACTGAAGAAG GAGAAACTGC CATGACTAGC CCCAATGGTA TGGACTGGAC ACTGGCAACT
ACAACACCTT TGGGTACATG GAGCAGTGTT ACCTATGGCA ATGGAATTTT TGTTGCAGTT
GACCTTTTTG GTATGTCTGG CAATCAGGTC ATGACCAGCC CCAATGGCAT AAGTTGGACA
ACGCATGCTT CCCCAGTAGC TGGATGGTTT AGTGTTGCCT ATGGCATGGA TTTGTTTGTG
GCAGTGGCTT ATCTGGGTGA AGGTACCAAT TTGGTCATGA CCAGCCCCAA TGGAATGAAC
TGGACCATTC ACCAAAGCGC AACAATTGCT GCATGGACTA GTGTCACCTA TGCAGAGGCT
GAACAAATCT TTGTGGCAGT GGCTGGTGGT GGTGTGGGCA CCAATTTGGT GATGACCAGT
CCCAATGGCA TGAATTGGAC CATTCAAGAA AGTGCAGCAG CTGCACAATG GATTAGTGTT
ACGTACAGCA ATGGAACACT TGTGGCAGTT TCTCTTGATG GCAAAGTCAT GACGAGTCAG
TCCAGCTAGA GTCAATGGTG TCTGTAAAAG TTTGTGAGCA AATCAAGCAG CAGCAGCAGT
TTTAGAGTAA GCATCCATAT ACCTCCTAGC TAATATTGAT TGG
 
Protein sequence
MTSPDGMNWT SQRSASQAEW RSIMYGNGIF VAVANGGMDD NHVMTSPNGI NWTMQESPPE 
IDNWNSVTFG MEKFVAIGAN TEEGETAMTS PNGMDWTLAT TTPLGTWSSV TYGNGIFVAV
DLFGMSGNQV MTSPNGISWT THASPVAGWF SVAYGMDLFV AVAYLGEGTN LVMTSPNGMN
WTIHQSATIA AWTSVTYAEA EQIFVAVAGG GVGTNLVMTS PNGMNWTIQE SAAAAQWISV
TYSNGTLVAV SLDGKVMTSQ SS